RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 EEFSECP57772 596 aaKnown RBP12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ACSM2AQ08AH3 577 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 USP41Q3LFD5 358 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ACSM2BQ68CK6 577 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 P2RY8Q86VZ1 359 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 VRK3Q8IV63 474 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 TMEM132CQ8N3T6 1108 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZBTB2Q8N680 514 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 FAR1Q8WVX9 515 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 Q96MT0 163 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 PSKH2Q96QS6 385 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 TRIM39Q9HCM9 518 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 IL26Q9NPH9 171 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 DNAJB9Q9UBS3 223 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF99A8MXY4 864 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 CLIC1O00299 241 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 TGFB1P01137 390 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 IGLV3-25P01717 112 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 HPCAL1P37235 193 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 SERPINB10P48595 397 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ARF5P84085 180 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 RELTQ969Z4 430 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ARNT2Q9HBZ2 717 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ABCB9Q9NP78 766 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 PAK1IP1Q9NWT1 392 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 FBXO10Q9UK96 956 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 BOLA1Q9Y3E2 137 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLC10A3P09131 477 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 CKMT1AP12532 417 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 DGKAP23743 735 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF135P52742 658 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 PHC1P78364 1004 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 ATP13A5Q4VNC0 1218 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF362Q5T0B9 420 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 DPF3Q92784 378 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 TOP1MTQ969P6 601 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 TTPALQ9BTX7 342 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 WRAP53Q9BUR4 548 aaKnown RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 LCTP09848 1927 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 TCRBV5S2A0A599 114 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLC35F4A4IF30 521 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 H3BN98 237 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 STC2O76061 302 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 OGNP20774 298 aaKnown RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 KIR3DL1P43629 444 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 MRPS15P82914 257 aaKnown RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 SYTL3Q4VX76 610 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 RAET1EQ8TD07 263 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 ARMC5Q96C12 935 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZFYVE19Q96K21 471 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 PPP1R2P1Q96PQ5 205 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 LINC00597Q9H2U6 94 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 CAPN10Q9HC96 672 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 HMG20AQ9NP66 347 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 C1orf109Q9NX04 203 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 CKAP5Q14008 2032 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 MANBAO00462 879 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 VPS4BO75351 444 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 CLDN9O95484 217 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 EPORP19235 508 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLC19A1P41440 591 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 VLDLRP98155 873 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 MC1RQ01726 317 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 CBX2Q14781 532 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 ADPRMQ3LIE5 342 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 CATSPEREQ5SY80 951 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 Q6ZVU0 165 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 CYP2U1Q7Z449 544 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 DDX53Q86TM3 631 aaKnown RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 CYB5D2Q8WUJ1 264 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 RBM4BQ9BQ04 359 aaKnown RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 TCF25Q9BQ70 676 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 RBM4Q9BWF3 364 aaKnown RBP12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 C11orf16Q9NQ32 467 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 ITGB1BP2Q9UKP3 347 aa12.85□□□□□ -0.35
TNFRSF8-203ENST00000417814 J3KTA2 159 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 M0QZQ0 153 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 PLK4O00444 970 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 TAPBPO15533 448 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 CACNG3O60359 315 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 TSPAN12O95859 305 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 GGT1P19440 569 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 GABRR2P28476 465 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 SPIBQ01892 262 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 MBTPS1Q14703 1052 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 CCSMST1Q4G0I0 132 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 CST9Q5W186 159 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 BCDIN3DQ7Z5W3 292 aaKnown RBP12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 DCP2Q8IU60 420 aaKnown RBP12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 STK40Q8N2I9 435 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 MFSD2AQ8NA29 543 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 HSH2DQ96JZ2 352 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 PHOX2BQ99453 314 aa12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF8-203ENST00000417814 MRM3Q9HC36 420 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms