RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 CDHR3Q6ZTQ4 885 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 FRA10AC1Q70Z53 315 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 TAOK1Q7L7X3 1001 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 ADAMTSL2Q86TH1 951 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 ZFAND4Q86XD8 727 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 LRRC56Q8IYG6 542 aaPredicted RBP12.02□□□□□ -0.49
SKA1-203ENST00000417656 OR2L3Q8NG85 312 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 OR2A1Q8NGT9 310 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 UBLCP1Q8WVY7 318 aaPredicted RBP12.02□□□□□ -0.49
SKA1-203ENST00000417656 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.02□□□□□ -0.49
SKA1-203ENST00000417656 FGF11Q92914 225 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 NAF1Q96HR8 494 aaKnown RBP12.02□□□□□ -0.49
SKA1-203ENST00000417656 CCDC138Q96M89 665 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 FAM60AQ9NP50 221 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 PDE7BQ9NP56 450 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 SLC6A20Q9NP91 592 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 FGF21Q9NSA1 209 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 ARL15Q9NXU5 204 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 RARRES3Q9UL19 164 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 ZMIZ1Q9ULJ6 1067 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 PCDHB11Q9Y5F2 797 aa12.02□□□□□ -0.49
SKA1-203ENST00000417656 WDFY3Q8IZQ1 3526 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 TMEM150CB9EJG8 249 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 NRP2O60462 931 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 TIAF1O95411 115 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 ALDOAP04075 364 aaKnown RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 HIST1H2AGP0C0S8 130 aaPredicted RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 FGF5P12034 268 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 HIST1H2ADP20671 130 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 GCAP28676 217 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 CRABP2P29373 138 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 SERPINB9P50453 376 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 CSRP3P50461 194 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 AP1S2P56377 157 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 YBX1P67809 324 aaKnown RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 DLG1Q12959 904 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 OR4D1Q15615 310 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 TAF1BQ53T94 588 aaPredicted RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 THEMIS2Q5TEJ8 643 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 PRAMEF13Q5VWM6 474 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 WDR93Q6P2C0 686 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 AGTRAPQ6RW13 159 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 TBC1D1Q86TI0 1168 aaPredicted RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 KCTD4Q8WVF5 259 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 ANKRD7Q92527 254 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 EXT2Q93063 718 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 ALKBH8Q96BT7 664 aaKnown RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 PTERQ96BW5 349 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 FBXL8Q96CD0 374 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 ZNF501Q96CX3 271 aaPredicted RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 MED8Q96G25 268 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 HIST1H2AHQ96KK5 128 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 UBXN10Q96LJ8 280 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 TEFMQ96QE5 360 aaKnown RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 HIST1H2AJQ99878 128 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 H2AFJQ9BTM1 129 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 DHRS4Q9BTZ2 278 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 TRIM54Q9BYV2 358 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 ASPSCR1Q9BZE9 553 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 B3GNT4Q9C0J1 378 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 ATG10Q9H0Y0 220 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 FANCEQ9HB96 536 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 CCDC177Q9NQR7 707 aaPredicted RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 INTS7Q9NVH2 962 aaKnown RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 ZNF180Q9UJW8 692 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 ACSL6Q9UKU0 697 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 NOVA2Q9UNW9 492 aaKnown RBP12.01□□□□□ -0.49
SKA1-203ENST00000417656 OARD1Q9Y530 152 aa12.01□□□□□ -0.49
SKA1-203ENST00000417656 TPRP12270 2363 aaKnown RBP12□□□□□ -0.49
SKA1-203ENST00000417656 A0A087X1B8 175 aa12□□□□□ -0.49
SKA1-203ENST00000417656 A0A096LPK6 155 aa12□□□□□ -0.49
SKA1-203ENST00000417656 TRIM49D1C9J1S8 452 aa12□□□□□ -0.49
SKA1-203ENST00000417656 MAP3K7O43318 606 aa12□□□□□ -0.49
SKA1-203ENST00000417656 HCRTR1O43613 425 aa12□□□□□ -0.49
SKA1-203ENST00000417656 KRT38O76015 456 aa12□□□□□ -0.49
SKA1-203ENST00000417656 FKBP9O95302 570 aa12□□□□□ -0.49
SKA1-203ENST00000417656 C2P06681 752 aa12□□□□□ -0.49
SKA1-203ENST00000417656 LTA4HP09960 611 aaKnown RBP12□□□□□ -0.49
SKA1-203ENST00000417656 ZNF28P17035 718 aa12□□□□□ -0.49
SKA1-203ENST00000417656 TYK2P29597 1187 aa12□□□□□ -0.49
SKA1-203ENST00000417656 CMPK1P30085 196 aa12□□□□□ -0.49
SKA1-203ENST00000417656 GRIA3P42263 894 aa12□□□□□ -0.49
SKA1-203ENST00000417656 MAGEA12P43365 314 aa12□□□□□ -0.49
SKA1-203ENST00000417656 GABRA4P48169 554 aa12□□□□□ -0.49
SKA1-203ENST00000417656 ATP6V0D1P61421 351 aa12□□□□□ -0.49
SKA1-203ENST00000417656 NAE1Q13564 534 aa12□□□□□ -0.49
SKA1-203ENST00000417656 IL11RAQ14626 422 aa12□□□□□ -0.49
SKA1-203ENST00000417656 NAA30Q147X3 362 aaPredicted RBP12□□□□□ -0.49
SKA1-203ENST00000417656 ZXDCQ2QGD7 858 aaPredicted RBP12□□□□□ -0.49
SKA1-203ENST00000417656 ICE2Q659A1 982 aa12□□□□□ -0.49
SKA1-203ENST00000417656 FCRL6Q6DN72 434 aa12□□□□□ -0.49
SKA1-203ENST00000417656 CYB5D1Q6P9G0 228 aa12□□□□□ -0.49
SKA1-203ENST00000417656 FIGLAQ6QHK4 219 aa12□□□□□ -0.49
SKA1-203ENST00000417656 PPP1R3BQ86XI6 285 aa12□□□□□ -0.49
SKA1-203ENST00000417656 CENPLQ8N0S6 344 aaPredicted RBP12□□□□□ -0.49
SKA1-203ENST00000417656 ZNF248Q8NDW4 579 aa12□□□□□ -0.49
SKA1-203ENST00000417656 OR1L3Q8NH93 324 aa12□□□□□ -0.49
SKA1-203ENST00000417656 AENQ8WTP8 325 aaKnown RBP12□□□□□ -0.49
SKA1-203ENST00000417656 KCNE4Q8WWG9 221 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms