RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 THEMIS2Q5TEJ8 643 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 SUSD1Q6UWL2 747 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 FRA10AC1Q70Z53 315 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 OR2A1Q8NGT9 310 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 UBXN10Q96LJ8 280 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 MIPEPQ99797 713 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 PCBD2Q9H0N5 130 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 APMAPQ9HDC9 416 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 FOXJ2Q9P0K8 574 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 SERTAD3Q9UJW9 196 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 KIF26BQ2KJY2 2108 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 NPEPPSL1A6NEC2 478 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 TLX3O43711 291 aaPredicted RBP22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 TUBBP07437 444 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 VSNL1P62760 191 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 CSHL1Q14406 222 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 ERCC6LQ2NKX8 1250 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 TAF1BQ53T94 588 aaPredicted RBP22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 FIGLAQ6QHK4 219 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 AGTRAPQ6RW13 159 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 SBSNQ6UWP8 590 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 LRRC69Q6ZNQ3 347 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 CMC1Q7Z7K0 106 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 PPFIBP2Q8ND30 876 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 OR2L3Q8NG85 312 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 UBLCP1Q8WVY7 318 aaPredicted RBP22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 NMRAL1Q9HBL8 299 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 CCDC177Q9NQR7 707 aaPredicted RBP22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 SNX15Q9NRS6 342 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 UTP6Q9NYH9 597 aaKnown RBP22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 FETUBQ9UGM5 382 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 RAXQ9Y2V3 346 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 OARD1Q9Y530 152 aa22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 V9GYY5 206 aaPredicted RBP22.24■■□□□ 1.15
SMARCB1-205ENST00000417137 CACNA1GO43497 2377 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 HMX2A2RU54 273 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 STMND1H3BQB6 276 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 GUCA1CO95843 209 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 ANXA5P08758 320 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 SLC35E2BP0CK96 405 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 CD1DP15813 335 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 MAGP20916 626 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 EIF2S3P41091 472 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 ABATP80404 500 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 CDKL1Q00532 357 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 PRDX1Q06830 199 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 TSNQ15631 228 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 GPR19Q15760 415 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 ZC3H12BQ5HYM0 836 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 KIAA1614Q5VZ46 1190 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 FAM20CQ8IXL6 584 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 SPATA6LQ8N4H0 392 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 DCAKDQ8WVC6 231 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 KCNE4Q8WWG9 221 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 FBXL8Q96CD0 374 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 ZNF501Q96CX3 271 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 ACAT2Q9BWD1 397 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 DPH1Q9BZG8 443 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 MRPS30Q9NP92 439 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 KLK4Q9Y5K2 254 aa22.23■■□□□ 1.15
SMARCB1-205ENST00000417137 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 TAF4O00268 1085 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 C2P06681 752 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 SNRPAP09012 282 aaKnown RBP22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 LTA4HP09960 611 aaKnown RBP22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 PSMB5P28074 263 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 GRIA3P42263 894 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 HNMTP50135 292 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 NAE1Q13564 534 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 ZIC1Q15915 447 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 PPP1R3AQ16821 1122 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 FAM83EQ2M2I3 478 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 ICE2Q659A1 982 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 CAPN13Q6MZZ7 669 aaPredicted RBP22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 CDHR3Q6ZTQ4 885 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 LRRC56Q8IYG6 542 aaPredicted RBP22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 PMEPA1Q969W9 287 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 KIAA1191Q96A73 305 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 MED8Q96G25 268 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 ATG10Q9H0Y0 220 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 ABCF3Q9NUQ8 709 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 ANKMY1Q9P2S6 941 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 TAC3Q9UHF0 121 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 IKZF3Q9UKT9 509 aa22.22■■□□□ 1.15
SMARCB1-205ENST00000417137 A0A096LPK6 155 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 CCDC189A1A4V9 331 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 TMEM150CB9EJG8 249 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 LIPCP11150 499 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 HRH2P25021 359 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 EMBQ6PCB8 327 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 ADGRD1Q6QNK2 874 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 MBOAT1Q6ZNC8 495 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 ZFAND4Q86XD8 727 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 GPSM1Q86YR5 675 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 GPR135Q8IZ08 494 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 DNAJC22Q8N4W6 341 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 STAG3L4Q8TBR4 150 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 MTBPQ96DY7 904 aa22.21■■□□□ 1.15
SMARCB1-205ENST00000417137 DCBLD2Q96PD2 775 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms