RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 AGAP7PQ5VUJ5 663 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 PTRHD1Q6GMV3 140 aaKnown RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 TTC23LQ6PF05 361 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 KCNMB4Q86W47 210 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 SLC13A5Q86YT5 568 aaPredicted RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 PARP9Q8IXQ6 854 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 TXLNBQ8N3L3 684 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 DTWD1Q8N5C7 304 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 METTL27Q8N6F8 245 aaPredicted RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 TTC29Q8NA56 475 aaPredicted RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 PPHLN1Q8NEY8 458 aaKnown RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 RAD51AP1Q96B01 352 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 AGAP4Q96P64 663 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 MIPEPQ99797 713 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 SELENOSQ9BQE4 189 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 RAB11FIP5Q9BXF6 653 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 RBSNQ9H1K0 784 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 AGPAT4Q9NRZ5 378 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 SEMA3GQ9NS98 782 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 IL1RAPL1Q9NZN1 696 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 NXT1Q9UKK6 140 aaKnown RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 TTC7AQ9ULT0 858 aaPredicted RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 NOVA2Q9UNW9 492 aaKnown RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 NUP210LQ5VU65 1888 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 KRT87PA6NCN2 255 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 SRPX2O60687 465 aaPredicted RBP14.17□□□□□ -0.14
RPS28-201ENST00000417088 MED26O95402 600 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 C1orf105O95561 183 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 ZSCAN5DPP0CG00 497 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 PSMB5P28074 263 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 RPL22P35268 128 aaKnown RBP14.17□□□□□ -0.14
RPS28-201ENST00000417088 BDKRB1P46663 353 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 Q0VFX4 171 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 RBBP7Q16576 425 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 TUBB8Q3ZCM7 444 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 SEL1L2Q5TEA6 688 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 FRMPD2BQ6IN97 320 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 ST6GALNAC3Q8NDV1 305 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 OR11G2Q8NGC1 345 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 HMGCLL1Q8TB92 370 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 DNAJB14Q8TBM8 379 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 PANX3Q96QZ0 392 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 MESP1Q9BRJ9 268 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 LHPPQ9H008 270 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 TREX1Q9NSU2 369 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 PAK5Q9P286 719 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 GNPTGQ9UJJ9 305 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 RUVBL2Q9Y230 463 aaKnown RBP14.17□□□□□ -0.14
RPS28-201ENST00000417088 KLK4Q9Y5K2 254 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 MAU2Q9Y6X3 613 aa14.17□□□□□ -0.14
RPS28-201ENST00000417088 CELSR2Q9HCU4 2923 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 LOC105369274A0A096LPK9 316 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 LOC102723532A0A0G2JNH3 316 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 A0A1W2PPV9 198 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 HYKKA2RU49 373 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 NRP2O60462 931 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 RPS3P23396 243 aaKnown RBP eCLIP14.16□□□□□ -0.144e-9■■■■□ 19.5
RPS28-201ENST00000417088 TSFMP43897 325 aaKnown RBP14.16□□□□□ -0.14
RPS28-201ENST00000417088 SESN2P58004 480 aaPredicted RBP14.16□□□□□ -0.14
RPS28-201ENST00000417088 CRADDP78560 199 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 IRAK1BP1Q5VVH5 260 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 LRRC6Q86X45 466 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 OR4N4Q8N0Y3 316 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 MPP5Q8N3R9 675 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 RNF10Q8N5U6 811 aaKnown RBP14.16□□□□□ -0.14
RPS28-201ENST00000417088 CCDC89Q8N998 374 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 OR2L3Q8NG85 312 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 OR2A1Q8NGT9 310 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 GSDMBQ8TAX9 411 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 GRHL3Q8TE85 626 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 SKA2Q8WVK7 121 aaPredicted RBP14.16□□□□□ -0.14
RPS28-201ENST00000417088 THOC3Q96J01 351 aaKnown RBP14.16□□□□□ -0.14
RPS28-201ENST00000417088 CRB3Q9BUF7 120 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 ZNF304Q9HCX3 659 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 MRFAP1Q9Y605 127 aa14.16□□□□□ -0.14
RPS28-201ENST00000417088 DIDO1Q9BTC0 2240 aaKnown RBP14.16□□□□□ -0.14
RPS28-201ENST00000417088 SVILO95425 2214 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 CRYBG3Q68DQ2 2970 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 A0A0J9YVX5 310 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 E2F3O00716 465 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 KPNA5O15131 536 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 NDUFS3O75489 264 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 NMBRP28336 390 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 YBX1P67809 324 aaKnown RBP14.15□□□□□ -0.14
RPS28-201ENST00000417088 KLC1Q07866 573 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 ZNF169Q14929 603 aaPredicted RBP14.15□□□□□ -0.14
RPS28-201ENST00000417088 CTSL3PQ5NE16 218 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 CNSTQ6PJW8 725 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 RNF44Q7L0R7 432 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 OTOAQ7RTW8 1153 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 RAB42Q8N4Z0 105 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 STT3BQ8TCJ2 826 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 COG1Q8WTW3 980 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 VPS50Q96JG6 964 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 CNDP1Q96KN2 507 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 EPS8L2Q9H6S3 715 aa14.15□□□□□ -0.14
RPS28-201ENST00000417088 EIF2B3Q9NR50 452 aaKnown RBP14.15□□□□□ -0.14
RPS28-201ENST00000417088 STOX2Q9P2F5 926 aaPredicted RBP14.15□□□□□ -0.14
RPS28-201ENST00000417088 ZC3H7BQ9UGR2 993 aaKnown RBP14.15□□□□□ -0.14
RPS28-201ENST00000417088 FAM169AQ9Y6X4 670 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms