RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TAF1AQ15573 450 aaPredicted RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 TATDN1Q6P1N9 297 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 NXPE1Q8N323 547 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 JSRP1Q96MG2 331 aaPredicted RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 METTL8Q9H825 291 aaKnown RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 DERAQ9Y315 318 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 SHPRHQ149N8 1683 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 PCDH7O60245 1069 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 AHSGP02765 367 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 AOC1P19801 751 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 FECHP22830 423 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 STOMP27105 288 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 S100A2P29034 98 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 RASSF5Q8WWW0 418 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 COQ8BQ96D53 544 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 GAL3ST4Q96RP7 486 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 RPF2Q9H7B2 306 aaKnown RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 IGSF9Q9P2J2 1179 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 SLC22A2O15244 555 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 SORBS2O94875 1100 aaKnown RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 ALPPP05187 535 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 GNAO1P09471 354 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 GMPRP36959 345 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 OR1E2P47887 323 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 SEC13P55735 322 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 HNRNPA0Q13151 305 aaKnown RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 ZNF829Q3KNS6 432 aaPredicted RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 SIRPB2Q5JXA9 342 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 TMED4Q7Z7H5 227 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 RANBP3LQ86VV4 465 aaPredicted RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 TREML1Q86YW5 311 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 FBXO15Q8NCQ5 510 aaPredicted RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 KLK6Q92876 244 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 PYURFQ96I23 114 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 SLC30A2Q9BRI3 323 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 FBRSL1Q9HCM7 1045 aaKnown RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 NANSQ9NR45 359 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 IGLV3-22A0A075B6J6 115 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 CDC7O00311 574 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 CKMT1AP12532 417 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 PRKCDQ05655 676 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 ADAM15Q13444 863 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 MSANTD2Q6P1R3 559 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 BRSK1Q8TDC3 778 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 CGREF1Q99674 301 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D14Q9P2M4 693 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 TMEM59LQ9UK28 342 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 ALG5Q9Y673 324 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 KERAO60938 352 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 G6PDP11413 515 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 CBLBQ13191 982 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 PTPRCAPQ14761 206 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 ZNF311Q5JNZ3 666 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 ERMP1Q7Z2K6 904 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 CRELD1Q96HD1 420 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 DPAGT1Q9H3H5 408 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 EIF2B3Q9NR50 452 aaKnown RBP11.78□□□□□ -0.52
UBR4-205ENST00000417040 MS4A12Q9NXJ0 267 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 PPLO60437 1756 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 PTPRJQ12913 1337 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 AFDNP55196 1824 aaKnown RBP11.77□□□□□ -0.52
UBR4-205ENST00000417040 H3BNH8 94 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 PRPS2P11908 318 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 EEFSECP57772 596 aaKnown RBP11.77□□□□□ -0.52
UBR4-205ENST00000417040 TEAD4Q15561 434 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 C1orf189Q5VU69 101 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 IRAK1BP1Q5VVH5 260 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 CTU1Q7Z7A3 348 aaKnown RBP11.77□□□□□ -0.52
UBR4-205ENST00000417040 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.52
UBR4-205ENST00000417040 MUS81Q96NY9 551 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 ZNF282Q9UDV7 671 aaPredicted RBP11.77□□□□□ -0.52
UBR4-205ENST00000417040 KCTD3Q9Y597 815 aa11.77□□□□□ -0.52
UBR4-205ENST00000417040 A0A1B0GVT2 93 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 A0A1W2PRB8 838 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 TBX18O95935 607 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 MAB21L1Q13394 359 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 NFE2L1Q14494 772 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 OR2T5Q6IEZ7 315 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 PHYKPLQ8IUZ5 450 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 OR2T29Q8NH02 315 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 CLCC1Q96S66 551 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 ABCB7O75027 752 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 APOL3O95236 402 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 KLK1P06870 262 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 HOXB6P17509 224 aaKnown RBP11.77□□□□□ -0.53
UBR4-205ENST00000417040 OR12D2P58182 307 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 ZNF404Q494X3 552 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 HSH2DQ96JZ2 352 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 NUSAP1Q9BXS6 441 aaKnown RBP11.77□□□□□ -0.53
UBR4-205ENST00000417040 C1orf21Q9H246 121 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 TFB2MQ9H5Q4 396 aaKnown RBP11.77□□□□□ -0.53
UBR4-205ENST00000417040 FETUBQ9UGM5 382 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 PTGDR2Q9Y5Y4 395 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 ARL5CA6NH57 179 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 PDCD5O14737 125 aa11.77□□□□□ -0.53
UBR4-205ENST00000417040 CHAF1BQ13112 559 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms