RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 PRKCDQ05655 676 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 PTPRCAPQ14761 206 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 CTF1Q16619 201 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 INAVAQ3KP66 663 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 USP39Q53GS9 565 aaKnown RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 NEK5Q6P3R8 708 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 TMEM207Q6UWW9 146 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 ANKRD46Q86W74 232 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 OR52B6Q8NGF0 335 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 ELMO1Q92556 727 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 VPS35Q96QK1 796 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 AMBRA1Q9C0C7 1298 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 ASB8Q9H765 288 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 ING3Q9NXR8 418 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 NPAP1Q9NZP6 1156 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 PCDHGB6Q9Y5F9 930 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 PCDHGB1Q9Y5G3 927 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 MAGEB17A8MXT2 336 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 MTHFD2P13995 350 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 PRDX3P30048 256 aaKnown RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 PIGAP37287 484 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 NPRL3Q12980 569 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 DDX39BQ13838 428 aaKnown RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 CCDC85BQ15834 202 aaPredicted RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 PLET1Q6UQ28 207 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 DDX53Q86TM3 631 aaKnown RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 PHYKPLQ8IUZ5 450 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 LYSMD2Q8IV50 215 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 PEX5LQ8IYB4 626 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 TCAIMQ8N3R3 496 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 WDR36Q8NI36 951 aaKnown RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 AP3S1Q92572 193 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 DPP7Q9UHL4 492 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 UBR3Q6ZT12 1888 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 GOLGA4Q13439 2230 aaKnown RBP11.32□□□□□ -0.6
SCN4B-202ENST00000415030 GON4LQ3T8J9 2241 aa11.32□□□□□ -0.6
SCN4B-202ENST00000415030 TLL1O43897 1013 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 MITFO75030 526 aaPredicted RBP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 LRATO95237 230 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 EBLN1P0CF75 366 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 SMPD1P17405 629 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 PTPN2P17706 415 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 CYP2A7P20853 494 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 CASP3P42574 277 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 CLCN4P51793 760 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 MRPS6P82932 125 aaKnown RBP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 CAMK2GQ13555 558 aaPredicted RBP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 TEAD4Q15561 434 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 ANXA8L1Q5VT79 327 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 DYNC2LI1Q8TCX1 351 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 ZNF675Q8TD23 568 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 LPPQ93052 612 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 DMRTB1Q96MA1 342 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 MBOAT4Q96T53 435 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 NTN4Q9HB63 628 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 ST3GAL5Q9UNP4 418 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 RAI2Q9Y5P3 530 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 LY75O60449 1722 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 CLIC1O00299 241 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 NDUFB5O43674 189 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 COL6A1P12109 1028 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 LBX1P52954 281 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 PCBP2Q15366 365 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 RUNDC3AQ59EK9 446 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 ARMC12Q5T9G4 340 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 FAM131AQ6UXB0 335 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 PTCHD4Q6ZW05 846 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 PNPLA1Q8N8W4 532 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 TEX37Q96LM6 180 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 APOLD1Q96LR9 279 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 POFUT2Q9Y2G5 429 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 URB1O60287 2271 aaKnown RBP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 LOC285095A0A1B0GVY8 99 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 ARVCFO00192 962 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 LCKP06239 509 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 IFNA8P32881 189 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 TUSC3Q13454 348 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 CTU2Q2VPK5 515 aaKnown RBP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 FBXL22Q6P050 247 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 FAM92BQ6ZTR7 304 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 CYP4Z1Q86W10 505 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 SETD6Q8TBK2 473 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 FATE1Q969F0 183 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 OMA1Q96E52 524 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 EXOC2Q96KP1 924 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 SNX18Q96RF0 628 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 ARID2Q68CP9 1835 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 LZTS3O60299 673 aaPredicted RBP11.31□□□□□ -0.6
SCN4B-202ENST00000415030 PRAMEF11O60813 436 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 JRKO75564 520 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 TCF3P15923 654 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 CTNNB1P35222 781 aa11.31□□□□□ -0.6
SCN4B-202ENST00000415030 HTR6P50406 440 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms