RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 OR6C2Q9NZP2 312 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 TAC3Q9UHF0 121 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 ATXN7L1Q9ULK2 861 aaPredicted RBP12.67□□□□□ -0.38
CNOT4-204ENST00000414802 TMCO1Q9UM00 188 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 SLC22A14Q9Y267 594 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 PTPRBP23467 1997 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 KNTC1P50748 2209 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 PIPSLA2A3N6 862 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 FAM221BA6H8Z2 402 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 ZNF839A8K0R7 811 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 ISM1B1AKI9 464 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 STX16-NPEPL1H3BU86 382 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 STX16O14662 325 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 RPS17P08708 135 aaKnown RBP12.67□□□□□ -0.38
CNOT4-204ENST00000414802 FGF3P11487 239 aaPredicted RBP12.67□□□□□ -0.38
CNOT4-204ENST00000414802 UGT2B7P16662 529 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 TSPAN8P19075 237 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 BGNP21810 368 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 GPR3P46089 330 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 ACADVLP49748 655 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 SLC18A1P54219 525 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 EPHA4P54764 986 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 CCL7P80098 99 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 UNC50Q53HI1 259 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 ZNF678Q5SXM1 525 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 CES4AQ5XG92 561 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 CAPN13Q6MZZ7 669 aaPredicted RBP12.67□□□□□ -0.38
CNOT4-204ENST00000414802 IRGCQ6NXR0 463 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 LRRC70Q7Z2Q7 622 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 NUDCD3Q8IVD9 361 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 SLC22A9Q8IVM8 553 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 TEX9Q8N6V9 391 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 NCSTNQ92542 709 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 OR4K3Q96R72 315 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 NUDT22Q9BRQ3 303 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 SGPP1Q9BX95 441 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 EVA1BQ9NVM1 165 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 TMEM9Q9P0T7 183 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 OPTCQ9UBM4 332 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 KLHL3Q9UH77 587 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 PCTPQ9UKL6 214 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 KLHL20Q9Y2M5 609 aa12.67□□□□□ -0.38
CNOT4-204ENST00000414802 SPTBN4Q9H254 2564 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 A0A1W2PQM1 296 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 DUX1O43812 170 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 PNLIPP16233 465 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 ACP1P24666 158 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 GGT5P36269 586 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 HSD17B2P37059 387 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 LIMK1P53667 647 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 NAGLUP54802 743 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 CDH13P55290 713 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 HERVK_113P63132 956 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 CFHR1Q03591 330 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 PRKAA1Q13131 559 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 PCBP2Q15366 365 aaKnown RBP eCLIP12.66□□□□□ -0.382e-8■■■□□ 16.4
CNOT4-204ENST00000414802 CHI3L2Q15782 390 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 ARMC6Q6NXE6 501 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 USP53Q70EK8 1073 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 GOLGA7Q7Z5G4 137 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 KLHDC8AQ8IYD2 350 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 FLVCR1-AS1Q8TAF5 88 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 FAM76AQ8TAV0 307 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 HMGCLL1Q8TB92 370 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 TGM7Q96PF1 710 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 OR2A14Q96R47 310 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 GATA5Q9BWX5 397 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-204ENST00000414802 ERVK-6Q9BXR3 956 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 KLHL25Q9H0H3 589 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 ABCG4Q9H172 646 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 DNAJC11Q9NVH1 559 aa12.66□□□□□ -0.38
CNOT4-204ENST00000414802 CUEDC1Q9NWM3 386 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-204ENST00000414802 SCN3AQ9NY46 2000 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 K7EPI3 171 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 E2F3O00716 465 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 CAPN5O15484 640 aaPredicted RBP12.65□□□□□ -0.38
CNOT4-204ENST00000414802 KIF1CO43896 1103 aaKnown RBP12.65□□□□□ -0.38
CNOT4-204ENST00000414802 PRICKLE3O43900 615 aaPredicted RBP12.65□□□□□ -0.38
CNOT4-204ENST00000414802 NRP2O60462 931 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 TRIM13O60858 407 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 SUPT7LO94864 414 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 NEFHP12036 1026 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 PVRP15151 417 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 IMPDH1P20839 514 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 MPSTP25325 297 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 CD1CP29017 333 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 LSSP48449 732 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 DNAJB13P59910 316 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 CDC16Q13042 620 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 GTF2H2Q13888 395 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 RBBP7Q16576 425 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 GTF2H2CQ6P1K8 395 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 SPESP1Q6UW49 350 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 FAM92BQ6ZTR7 304 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 TMPRSS9Q7Z410 1059 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 DCBLD1Q8N8Z6 715 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 PPP1R14CQ8TAE6 165 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 NETO1Q8TDF5 533 aa12.65□□□□□ -0.38
CNOT4-204ENST00000414802 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
CNOT4-204ENST00000414802 CCDC126Q96EE4 140 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms