RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ANGPTL2Q9UKU9 493 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 CNOT6Q9ULM6 557 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 TTC7AQ9ULT0 858 aaPredicted RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 PADI4Q9UM07 663 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 GPR34Q9UPC5 381 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 KCNK6Q9Y257 313 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 AAR2Q9Y312 384 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 U3KQA8 63 aa4.8□□□□□ -1.64
VPS41-205ENST00000414632 MAP1BP46821 2468 aaKnown RBP4.8□□□□□ -1.64
VPS41-205ENST00000414632 DSPP15924 2871 aaKnown RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 DMXL2Q8TDJ6 3036 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 PKD1L2Q7Z442 2459 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 GLYATL1P3A0A0U1RQE8 302 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 OR51F1A6NGY5 319 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 GAPDHSO14556 408 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 TOR1BO14657 336 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 SNX2O60749 519 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 SLC25A14O95258 325 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 AP2A1O95782 977 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 EML2O95834 649 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 EPOP01588 193 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 HOXC4P09017 264 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 C1QTNF9P0C862 333 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 CKMT1AP12532 417 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ACP5P13686 325 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 DDCP20711 480 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ACP1P24666 158 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 PBLDP30039 288 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 RPL22P35268 128 aaKnown RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 ACTN2P35609 894 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 HMGCLP35914 325 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 MAPK10P53779 464 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 SUMO3P55854 103 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 MAZP56270 477 aaKnown RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 SESN2P58004 480 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 CRADDP78560 199 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 BASP1P80723 227 aaKnown RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 CCNG2Q16589 344 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 PARP6Q2NL67 630 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 P3H1Q32P28 736 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 FLYWCH1Q4VC44 716 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 KHDC1LQ5JSQ8 128 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 CERCAMQ5T4B2 595 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 KCTD11Q693B1 232 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 HIBCHQ6NVY1 386 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 RANBP10Q6VN20 620 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 PPP1R21Q6ZMI0 780 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 DET1Q7L5Y6 550 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ADGRG6Q86SQ4 1221 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ATG4DQ86TL0 474 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 ZNF761Q86XN6 746 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 GALNT13Q8IUC8 556 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 LIX1LQ8IVB5 337 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 RASGEF1CQ8N431 466 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 TRAM1L1Q8N609 369 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 Q8N9G6 341 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 DNAAF3Q8N9W5 541 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 MAPK15Q8TD08 544 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ZNF480Q8WV37 535 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 STON2Q8WXE9 905 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ADAMTS14Q8WXS8 1223 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 CCT6BQ92526 530 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 GLYATL1Q969I3 302 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 DNAJC1Q96KC8 554 aaKnown RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 OR2M4Q96R27 311 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 CCDC3Q9BQI4 270 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ZSCAN5AQ9BUG6 496 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 GSDMCQ9BYG8 508 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 OSGEPL1Q9H4B0 414 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ASB8Q9H765 288 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 CNTD2Q9H8S5 307 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 LRRC40Q9H9A6 602 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 SARS2Q9NP81 518 aaKnown RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 IL26Q9NPH9 171 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 KCTD5Q9NXV2 234 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 IL17CQ9P0M4 197 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 TAAR2Q9P1P5 351 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.79□□□□□ -1.64
VPS41-205ENST00000414632 CPNE7Q9UBL6 633 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 TRPS1Q9UHF7 1281 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 SLC17A4Q9Y2C5 497 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 DNAJC16Q9Y2G8 782 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 PKP3Q9Y446 797 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 JRKLQ9Y4A0 524 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 CSNK1G3Q9Y6M4 447 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 DGKBQ9Y6T7 804 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 ADAMTS20P59510 1910 aa4.79□□□□□ -1.64
VPS41-205ENST00000414632 UNC13CQ8NB66 2214 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 LAMA5O15230 3695 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 USP24Q9UPU5 2620 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 A0A087WV62 115 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 TCRBV7S3A2A0A539 114 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PMS2P1A4D2B8 440 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 RGSL1A5PLK6 1076 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 OR2AG2A6NM03 316 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 C2orf81A6NN90 581 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 F8W8V4 182 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 GOLGA8MH3BSY2 632 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PGRMC1O00264 195 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 GRID2O43424 1007 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms