RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 PAQR3Q6TCH7 311 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 FAM83HQ6ZRV2 1179 aaPredicted RBP9.68□□□□□ -0.86
DDB1-202ENST00000414411 PHACTR4Q8IZ21 702 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 LILRA3Q8N6C8 439 aaPredicted RBP9.68□□□□□ -0.86
DDB1-202ENST00000414411 SIDT2Q8NBJ9 832 aaKnown RBP9.68□□□□□ -0.86
DDB1-202ENST00000414411 HIPK4Q8NE63 616 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 CCL4L1Q8NHW4 92 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ATOH1Q92858 354 aaPredicted RBP9.68□□□□□ -0.86
DDB1-202ENST00000414411 WDR41Q9HAD4 459 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 FIS1Q9Y3D6 152 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ARHGAP33O14559 1287 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 UBFD1O14562 309 aaKnown RBP9.68□□□□□ -0.86
DDB1-202ENST00000414411 SCAMP1O15126 338 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 SMIM24O75264 130 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 TSPAN12O95859 305 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 CFIP05156 583 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ACP5P13686 325 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 HERVK_113P63132 956 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 GRIK2Q13002 908 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 NFE2L1Q14494 772 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 SHBQ15464 509 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 GSTA3Q16772 222 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ZNF423Q2M1K9 1284 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 PLEKHS1Q5SXH7 462 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 CFAP206Q8IYR0 622 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ZBTB2Q8N680 514 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 HMGCLL1Q8TB92 370 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 HM13Q8TCT9 377 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ASZ1Q8WWH4 475 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ELMO1Q92556 727 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 PDLIM5Q96HC4 596 aaKnown RBP9.68□□□□□ -0.86
DDB1-202ENST00000414411 CDRT15Q96T59 188 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ELF4Q99607 663 aaPredicted RBP9.68□□□□□ -0.86
DDB1-202ENST00000414411 ERVK-6Q9BXR3 956 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ZDHHC5Q9C0B5 715 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 EFCAB1Q9HAE3 211 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 SARS2Q9NP81 518 aaKnown RBP9.68□□□□□ -0.86
DDB1-202ENST00000414411 ADAMTS6Q9UKP5 1117 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 TRAF6Q9Y4K3 522 aa9.68□□□□□ -0.86
DDB1-202ENST00000414411 ANKRD12Q6UB98 2062 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 EIF3FO00303 357 aaPredicted RBP9.67□□□□□ -0.86
DDB1-202ENST00000414411 CASQ2O14958 399 aaPredicted RBP9.67□□□□□ -0.86
DDB1-202ENST00000414411 SUPT7LO94864 414 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 ENO3P13929 434 aaPredicted RBP9.67□□□□□ -0.86
DDB1-202ENST00000414411 AK4P27144 223 aaPredicted RBP9.67□□□□□ -0.86
DDB1-202ENST00000414411 PDHA2P29803 388 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 HNRNPKP61978 463 aaKnown RBP eCLIP9.67□□□□□ -0.86
DDB1-202ENST00000414411 PLOD1Q02809 727 aaPredicted RBP9.67□□□□□ -0.86
DDB1-202ENST00000414411 HSPA14Q0VDF9 509 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 RPA4Q13156 261 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 ART3Q13508 389 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 CEACAM7Q14002 265 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 SQLEQ14534 574 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 PPP1R3AQ16821 1122 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 HLA-BQ31612 363 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 PLA2G4EQ3MJ16 856 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 UNC50Q53HI1 259 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 PRRT3Q5FWE3 981 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 CAPRIN2Q6IMN6 1127 aaKnown RBP9.67□□□□□ -0.86
DDB1-202ENST00000414411 CYHR1Q6ZMK1 362 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 GK5Q6ZS86 529 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 VRK3Q8IV63 474 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 RHEBL1Q8TAI7 183 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 LRRC61Q9BV99 259 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 VCX3BQ9H321 246 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 SMOC1Q9H4F8 434 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 FSCN3Q9NQT6 498 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 APOBEC3BQ9UH17 382 aaKnown RBP9.67□□□□□ -0.86
DDB1-202ENST00000414411 TRMT6Q9UJA5 497 aaKnown RBP9.67□□□□□ -0.86
DDB1-202ENST00000414411 PACSIN3Q9UKS6 424 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 PCOLCE2Q9UKZ9 415 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 KCNK6Q9Y257 313 aa9.67□□□□□ -0.86
DDB1-202ENST00000414411 A0A1B0GTQ1 180 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 A6NCN8 305 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 UBDO15205 165 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 DFNA5O60443 496 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 PIAS2O75928 621 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 CELA2BP08218 269 aaPredicted RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 ZNF806P0C7X5 589 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 CBSLP0DN79 551 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 MTHFD2P13995 350 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 VCLP18206 1134 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 XRCC1P18887 633 aaPredicted RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 PEX2P28328 305 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 PBLDP30039 288 aaPredicted RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 CBSP35520 551 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 PREPP48147 710 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 IL2P60568 153 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 ILF3Q12906 894 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDB1-202ENST00000414411 C1orf61Q13536 156 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 BOP1Q14137 746 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 FLOT2Q14254 428 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 MAPRE2Q15555 327 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 OR4D1Q15615 310 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 CLEC6AQ6EIG7 209 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 TMEM154Q6P9G4 183 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 IL27RAQ6UWB1 636 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 WASH2PQ6VEQ5 465 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 PDSS2Q86YH6 399 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 RASGRP3Q8IV61 690 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms