RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ARHGEF18Q6ZSZ5 1173 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 RNF44Q7L0R7 432 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 NLRP9Q7RTR0 991 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 TAX1BP1Q86VP1 789 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 C2orf73Q8N5S3 287 aaPredicted RBP11.61□□□□□ -0.55
LIMS2-210ENST00000413578 METTL27Q8N6F8 245 aaPredicted RBP11.61□□□□□ -0.55
LIMS2-210ENST00000413578 TC2NQ8N9U0 490 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 FAM71DQ8N9W8 422 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 TTC29Q8NA56 475 aaPredicted RBP11.61□□□□□ -0.55
LIMS2-210ENST00000413578 STT3BQ8TCJ2 826 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 HAS2Q92819 552 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 ZUFSPQ96AP4 578 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 C8orf44Q96CB5 159 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 C10orf90Q96M02 699 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 SELENOSQ9BQE4 189 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 CARD6Q9BX69 1037 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 INTS7Q9NVH2 962 aaKnown RBP11.61□□□□□ -0.55
LIMS2-210ENST00000413578 SLC2A6Q9UGQ3 507 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 MAU2Q9Y6X3 613 aa11.61□□□□□ -0.55
LIMS2-210ENST00000413578 HIVEP1P15822 2718 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 LOC105369274A0A096LPK9 316 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 TRAV17A0A0B4J275 112 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 LOC102723532A0A0G2JNH3 316 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 A0A1W2PPV9 198 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 TJP3O95049 919 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 RPN2P04844 631 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 PRR35P0CG20 571 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 FDXRP22570 491 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 AOAHP28039 575 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 PTGER4P35408 488 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 CSE1LP55060 971 aaKnown RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 RWDD2BP57060 319 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 VSX2P58304 361 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 HSPA14Q0VDF9 509 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 KLF1Q13351 362 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 SEMA3AQ14563 771 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 NAA30Q147X3 362 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 SF1Q15637 639 aaKnown RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 ZNF630Q2M218 657 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 P3H1Q32P28 736 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 PRMT9Q6P2P2 845 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 AFTPHQ6ULP2 937 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 BNC2Q6ZN30 1099 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 KBTBD2Q8IY47 623 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 OR4N4Q8N0Y3 316 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 OR52K1Q8NGK4 314 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 SLC35B2Q8TB61 432 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 HMGCLL1Q8TB92 370 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 BRIX1Q8TDN6 353 aaKnown RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 ASZ1Q8WWH4 475 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 HDAC10Q969S8 669 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 CCDC120Q96HB5 630 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 ZNF778Q96MU6 729 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 ZNF304Q9HCX3 659 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 IGSF5Q9NSI5 407 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 PLA2G3Q9NZ20 509 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 ZNF282Q9UDV7 671 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 C3orf18Q9UK00 162 aa11.6□□□□□ -0.55
LIMS2-210ENST00000413578 MRPS2Q9Y399 296 aaKnown RBP11.6□□□□□ -0.55
LIMS2-210ENST00000413578 MTORP42345 2549 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 HYKKA2RU49 373 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 OR2A25A4D2G3 310 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 IQCF5A8MTL0 148 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 MAP2K7O14733 419 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 SUN1O94901 812 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 SERPINA7P05543 415 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 PSMB5P28074 263 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 ARG2P78540 354 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 CDH17Q12864 832 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 PRTGQ2VWP7 1150 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 VWA2Q5GFL6 755 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 TSTD2Q5T7W7 516 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 NDUFAF7Q7L592 441 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 LINC00523Q86TU6 105 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 LAPTM4BQ86VI4 370 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 CCDC170Q8IYT3 715 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 LRRC57Q8N9N7 239 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 OR2L3Q8NG85 312 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 MIEF2Q96C03 454 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 LURAP1Q96LR2 239 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 ALS2CR12Q96Q35 445 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 RAB11FIP5Q9BXF6 653 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 RNF32Q9H0A6 362 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 RUBCNLQ9H714 662 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 SYNPO2LQ9H987 977 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 ABI3Q9P2A4 366 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 R3HDM2Q9Y2K5 976 aaKnown RBP11.59□□□□□ -0.55
LIMS2-210ENST00000413578 PKDREJQ9NTG1 2253 aa11.59□□□□□ -0.55
LIMS2-210ENST00000413578 IGHV1-45A0A0A0MS14 117 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 NSG1A0A0A6YYJ2 146 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 DYTNA2CJ06 578 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 BTNL10A8MVZ5 291 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 F8W8V4 182 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 PSMD3O43242 534 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 BMP10O95393 424 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 C1orf105O95561 183 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 MST1P26927 711 aa11.58□□□□□ -0.56
LIMS2-210ENST00000413578 CA7P43166 264 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms