RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 SLC22A18Q96BI1 424 aa29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 CD180Q99467 661 aa29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 PITPNM3Q9BZ71 974 aa29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 CCDC177Q9NQR7 707 aaPredicted RBP29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 KLK13Q9UKR3 277 aa29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 SLC9B1P1A6NJY1 282 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 ST6GAL1P15907 406 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 CREB1P16220 341 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 SLC18A2Q05940 514 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 THEMIS2Q5TEJ8 643 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 KIAA1614Q5VZ46 1190 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 PRSS42Q7Z5A4 293 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 PDPRQ8NCN5 879 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 C12orf65Q9H3J6 166 aaKnown RBP29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 C1GALT1Q9NS00 363 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 INTS7Q9NVH2 962 aaKnown RBP29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 NUDT4Q9NZJ9 180 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 PCDHB11Q9Y5F2 797 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 PMS2P1A4D2B8 440 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 RBP1P09455 135 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 SBK3P0C264 359 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 GDF5P43026 501 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 TRA2AQ13595 282 aaKnown RBP eCLIP29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 SLC5A12Q1EHB4 618 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 PTCHD3Q3KNS1 767 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 OR56A3Q8NH54 315 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 TMEM79Q9BSE2 394 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 DCDC2Q9UHG0 476 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 WASF3Q9UPY6 502 aa29.49■■■□□ 2.31
CSNK1E-206ENST00000413574 A0A1W2PNU3 283 aaPredicted RBP29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 SYCE1LA8MT33 242 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 S100BP04271 92 aaPredicted RBP29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 HNMTP50135 292 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 HDXQ7Z353 690 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 CACTIN-AS1Q8N1I8 211 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 OR2L3Q8NG85 312 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 TRAPPC9Q96Q05 1148 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 MRPL57Q9BQC6 102 aaKnown RBP29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 SGPP1Q9BX95 441 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 MRPL46Q9H2W6 279 aaKnown RBP29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 ZNF768Q9H5H4 540 aaKnown RBP29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 WWOXQ9NZC7 414 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 SEMA5BQ9P283 1151 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 EMCNQ9ULC0 261 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 SH2B3Q9UQQ2 575 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 AKAP13Q12802 2813 aa29.48■■■□□ 2.31
CSNK1E-206ENST00000413574 HEATR5BQ9P2D3 2071 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 A0A0J9YY10 115 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 COPEO14579 308 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 MAP2K7O14733 419 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 GSTA1P08263 222 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 ANKRD34CP0C6C1 535 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 HGFP14210 728 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 AGTR2P50052 363 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 SULT1C3Q6IMI6 304 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 LCA5Q86VQ0 697 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 KLHL6Q8WZ60 621 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 OR4K3Q96R72 315 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 RUFY1Q96T51 708 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 STRADBQ9C0K7 418 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 PTBP2Q9UKA9 531 aaKnown RBP29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 ASB1Q9Y576 335 aa29.47■■■□□ 2.31
CSNK1E-206ENST00000413574 CACNA1AO00555 2505 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 CCDC189A1A4V9 331 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 AGPSO00116 658 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 TOX3O15405 576 aaPredicted RBP29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 GLRA3O75311 464 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 SPAG7O75391 227 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 MAGP20916 626 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 CRHR1P34998 444 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 HSPA7P48741 367 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 PFKFB4Q16877 469 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 PRAMEF13Q5VWM6 474 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 CAPN13Q6MZZ7 669 aaPredicted RBP29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 CROCCP2Q86T23 111 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 SCNM1Q9BWG6 230 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 OCIAD1Q9NX40 245 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 SLC22A14Q9Y267 594 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 ASPMQ8IZT6 3477 aa29.46■■■□□ 2.31
CSNK1E-206ENST00000413574 MYZAPP0CAP1 466 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 GFAPP14136 432 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 SLC6A12P48065 614 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 CCT5P48643 541 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 KCNAB1Q14722 419 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 ZIC1Q15915 447 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 CDKL4Q5MAI5 379 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 ICE2Q659A1 982 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 BANPQ8N9N5 519 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 PGM2Q96G03 612 aa29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 LIN37Q96GY3 246 aaPredicted RBP29.45■■■□□ 2.31
CSNK1E-206ENST00000413574 TARM1B6A8C7 271 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 TMX2-CTNND1H3BSU7 103 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 NRP2O60462 931 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 ZBTB11O95625 1053 aaPredicted RBP29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 NPPBP16860 134 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 CSTF2P33240 577 aaKnown RBP eCLIP29.45■■■□□ 2.31e-6■□□□□ 11.1
CSNK1E-206ENST00000413574 SH3BP2P78314 561 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 PRDX1Q06830 199 aaKnown RBP29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 TNFAIP8L3Q5GJ75 292 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 RAB11FIP2Q7L804 512 aa29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms