RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 NHLRC1Q6VVB1 395 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 C9orf47Q6ZRZ4 202 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 C1QL2Q7Z5L3 287 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 CROCCP3Q8IVE0 287 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 KIAA0895Q8NCT3 520 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 OR8H1Q8NGG4 311 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 OR1J1Q8NGS3 322 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 SECTM1Q8WVN6 248 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 SEPT1Q8WYJ6 367 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 SMG7Q92540 1137 aaKnown RBP4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 PDLIM5Q96HC4 596 aaKnown RBP4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 ZNF479Q96JC4 524 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 FAM20AQ96MK3 541 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 C17orf77Q96MU5 243 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 TMEM204Q9BSN7 226 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 THAP9Q9H5L6 903 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 Q9H8V8 135 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 TRPC4Q9UBN4 977 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 PCDHGA1Q9Y5H4 931 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 CACNA1IQ9P0X4 2223 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 A0A0A6YYC8 382 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 TRAV24A0A0B4J272 114 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 A0A1W2PPI3 338 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 ANKRD61A6NGH8 418 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 SDR42E2A6NKP2 422 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 I3L1I5 382 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 RTCAO00442 366 aaKnown RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 TTI1O43156 1089 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 BMP15O95972 392 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 C9P02748 559 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 SERPING1P05155 500 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 ALPLP05186 524 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 C8orf89P0DMQ9 161 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 SERPINB6P35237 376 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 FRKP42685 505 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 HTR6P50406 440 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 DVL1P1P54792 670 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 DSCR9P59020 149 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 LINC00205P59089 165 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 KIF5AQ12840 1032 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 NPRL3Q12980 569 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 KIR2DS3Q14952 304 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 PHKG1Q16816 387 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 PDSS1Q5T2R2 415 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 AWAT2Q6E213 333 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 RAB12Q6IQ22 244 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 BTNL8Q6UX41 500 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 ZNF852Q6ZMS4 543 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 TUBA1AQ71U36 451 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 GET4Q7L5D6 327 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 RTN4RL2Q86UN3 420 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 PEX5LQ8IYB4 626 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 SFRP1Q8N474 314 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 LPCAT1Q8NF37 534 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 OR2T12Q8NG77 320 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 PSMA8Q8TAA3 256 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 SPATA20Q8TB22 786 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 ZNF473Q8WTR7 871 aaKnown RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 PGM2Q96G03 612 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 ZNF583Q96ND8 569 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 TUBA1CQ9BQE3 449 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 CCDC3Q9BQI4 270 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 ZPBPQ9BS86 351 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 EBF2Q9HAK2 575 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 UPF2Q9HAU5 1272 aaKnown RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 ZNF701Q9NV72 531 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 PKD2L2Q9NZM6 624 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 FBXW2Q9UKT8 454 aa4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 RUVBL2Q9Y230 463 aaKnown RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 HBS1LQ9Y450 684 aaKnown RBP4.44□□□□□ -1.7
HMGB3P31-201ENST00000413333 IGLV5-45A0A087WSX0 123 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 C13orf42A0A1B0GVH6 325 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 LACTBL1A8MY62 500 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 PRSS46E5RG02 174 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 ARPC2O15144 300 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 HTATSF1O43719 755 aaKnown RBP4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 SLC22A3O75751 556 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 AKAP3O75969 853 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 CDK4P11802 303 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 MSH3P20585 1137 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 CDH3P22223 829 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 NKX2-1P43699 371 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 CDX1P47902 265 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 KHKP50053 298 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 ZNF132P52740 706 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 ADARP55265 1226 aaKnown RBP4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 CLDN15P56746 228 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 KIAA1024LP59773 190 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 RBBP7Q16576 425 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 DCAF10Q5QP82 559 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 FAM46CQ5VWP2 391 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 FAM166AQ6J272 317 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 PRSS55Q6UWB4 352 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 SPATA2LQ8IUW3 424 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 AQP12AQ8IXF9 295 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 EID3Q8N140 333 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 NDUFAF2Q8N183 169 aa4.43□□□□□ -1.7
HMGB3P31-201ENST00000413333 CCDC63Q8NA47 563 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms