RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TMOD1P28289 359 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 HSPA1LP34931 641 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 PTGER4P35408 488 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 PTGER3P43115 390 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 AVPR1BP47901 424 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 ATP5OP48047 213 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 NUDT6P53370 316 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 CTSCP53634 463 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 SLC34A1Q06495 639 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 PLA2G7Q13093 441 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 SNTB2Q13425 540 aaKnown RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 ACKR1Q16570 336 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 IMMTQ16891 758 aaKnown RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 KIF19Q2TAC6 998 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 PPP6R3Q5H9R7 873 aaPredicted RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 EARS2Q5JPH6 523 aaKnown RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 C6orf10Q5SRN2 563 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 GCNT6Q5T4J0 391 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 FAM46CQ5VWP2 391 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 WBP2NLQ6ICG8 309 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 B3GNT6Q6ZMB0 384 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 AMIGO1Q86WK6 493 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 PRIMA1Q86XR5 153 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 ARHGAP24Q8N264 748 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 SLC5A8Q8N695 610 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 PCDH20Q8N6Y1 951 aaKnown RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 LEMD2Q8NC56 503 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 SSMEM1Q8WWF3 244 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 DNAAF4Q8WXU2 420 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 PROX1Q92786 737 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 MTERF3Q96E29 417 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 RITA1Q96K30 269 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 QRFPRQ96P65 431 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 RAD9AQ99638 391 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 GPA33Q99795 319 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 ZPBPQ9BS86 351 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 ZSCAN5AQ9BUG6 496 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 IDI2Q9BXS1 227 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 MTMR12Q9C0I1 747 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 TMEM117Q9H0C3 514 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 FAM234AQ9H0X4 552 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 FOXP1Q9H334 677 aaPredicted RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 AAMDCQ9H7C9 122 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 LRRC40Q9H9A6 602 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 Q9N2K0 584 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 CNGB3Q9NQW8 809 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 FARSBQ9NSD9 589 aaKnown RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 RAI14Q9P0K7 980 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 MRPS7Q9Y2R9 242 aaKnown RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 MFHAS1Q9Y4C4 1052 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.68□□□□□ -1.665e-7■■□□□ 14.2
LSM5-205ENST00000409952 TMEM129A0AVI4 362 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 KCNU1A8MYU2 1149 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 FAM25EA8MYX2 175 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 CHADO15335 359 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 RHOBTB1O94844 696 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 OR6A2O95222 327 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 GZMAP12544 262 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 CPA3P15088 417 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 PTPN4P29074 926 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 BDKRB2P30411 391 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 HNRNPH1P31943 449 aaKnown RBP4.67□□□□□ -1.66
LSM5-205ENST00000409952 OTX2P32243 289 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 OR3A1P47881 315 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 PPP3CCP48454 512 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 FMO5P49326 533 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 MMP15P51511 669 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 SH3BGRP55822 239 aaPredicted RBP4.67□□□□□ -1.66
LSM5-205ENST00000409952 HUNKP57058 714 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 IRX4P78413 519 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 LAMB3Q13751 1172 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 FILIP1LQ4L180 1135 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 MIDNQ504T8 468 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 LDLRAP1Q5SW96 308 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 AGAP6Q5VW22 663 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 C18orf63Q68DL7 685 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 SULT1C3Q6IMI6 304 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 OLFML1Q6UWY5 402 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 FAM57BQ71RH2 274 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 SHFQ7M4L6 423 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 ATG9AQ7Z3C6 839 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 RTN4RL2Q86UN3 420 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 CUZD1Q86UP6 607 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 LAX1Q8IWV1 398 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 ZNF679Q8IYX0 411 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 FAM71CQ8NEG0 241 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 OR52B4Q8NGK2 314 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 OR5M8Q8NGP6 311 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 OR13C2Q8NGS9 318 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 OR10T2Q8NGX3 314 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 TMEM163Q8TC26 289 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 DQX1Q8TE96 717 aaKnown RBP4.67□□□□□ -1.66
LSM5-205ENST00000409952 SLC35F5Q8WV83 523 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 SMPDL3BQ92485 455 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 WASF1Q92558 559 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 ZFYVE19Q96K21 471 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 CNOT6LQ96LI5 555 aaKnown RBP4.67□□□□□ -1.66
LSM5-205ENST00000409952 PCDHB18PQ96TA0 734 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 BTBD10Q9BSF8 475 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 TRMOQ9BU70 441 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms