RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 NEK10Q6ZWH5 1172 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 TMEM151BQ8IW70 566 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 RAB42Q8N4Z0 105 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 C2CD4AQ8NCU7 369 aaPredicted RBP16.99■□□□□ 0.31
LSM5-204ENST00000409909 PROKR1Q8TCW9 393 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 CD200R1Q8TD46 325 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 ASB11Q8WXH4 323 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 INPP5DQ92835 1189 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 PKP4Q99569 1192 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 TRIM51Q9BSJ1 452 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 FAM167BQ9BTA0 163 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 AARSD1Q9BTE6 412 aaKnown RBP16.99■□□□□ 0.31
LSM5-204ENST00000409909 TRIM4Q9C037 500 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 CCDC68Q9H2F9 335 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 IRAK4Q9NWZ3 460 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 FLNCQ14315 2725 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 ARGFXA6NJG6 315 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 C9J4A7 227 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 MKRN2OSH3BPM6 223 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 GFYI3L273 518 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 TP73O15350 636 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 TTI1O43156 1089 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 CNOT3O75175 753 aaKnown RBP16.98■□□□□ 0.31
LSM5-204ENST00000409909 TTC4O95801 387 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 ITGAXP20702 1163 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 MCM3P25205 808 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 FOXL2P58012 376 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 DCDP81605 110 aaKnown RBP16.98■□□□□ 0.31
LSM5-204ENST00000409909 MORF4L2Q15014 288 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 TTLL9Q3SXZ7 439 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 ZC3H12BQ5HYM0 836 aaKnown RBP16.98■□□□□ 0.31
LSM5-204ENST00000409909 HP1BP3Q5SSJ5 553 aaPredicted RBP16.98■□□□□ 0.31
LSM5-204ENST00000409909 MLIPQ5VWP3 458 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 TCTN3Q6NUS6 607 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 HIBCHQ6NVY1 386 aaPredicted RBP16.98■□□□□ 0.31
LSM5-204ENST00000409909 SUSD1Q6UWL2 747 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 ZNF285Q96NJ3 590 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 WDR83Q9BRX9 315 aaKnown RBP16.98■□□□□ 0.31
LSM5-204ENST00000409909 NDC1Q9BTX1 674 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 ACAT2Q9BWD1 397 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 ENAMQ9NRM1 1142 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 FAM114A2Q9NRY5 505 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 SLC22A11Q9NSA0 550 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 SRPK3Q9UPE1 567 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 COMMD10Q9Y6G5 202 aa16.98■□□□□ 0.31
LSM5-204ENST00000409909 SETXQ7Z333 2677 aaKnown RBP16.98■□□□□ 0.31
LSM5-204ENST00000409909 FLNBO75369 2602 aaKnown RBP16.98■□□□□ 0.31
LSM5-204ENST00000409909 ASH1LQ9NR48 2969 aaKnown RBP16.97■□□□□ 0.31
LSM5-204ENST00000409909 SLC16A8O95907 504 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 CATP04040 527 aaKnown RBP16.97■□□□□ 0.31
LSM5-204ENST00000409909 PDGFAP04085 211 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 MPC1LP0DKB6 136 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 ELK3P41970 407 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 SLC9A5Q14940 896 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 NKAIN1Q4KMZ8 207 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 SPANXN3Q5MJ09 141 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 FRMPD2BQ6IN97 320 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 TTLL10Q6ZVT0 673 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 PIWIL4Q7Z3Z4 852 aaKnown RBP16.97■□□□□ 0.31
LSM5-204ENST00000409909 CNTN4Q8IWV2 1026 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 CPNE9Q8IYJ1 553 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 FBXO15Q8NCQ5 510 aaPredicted RBP16.97■□□□□ 0.31
LSM5-204ENST00000409909 RUNDC3BQ96NL0 473 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 NDNQ99608 321 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 SELENOSQ9BQE4 189 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 NAT9Q9BTE0 207 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 DHRS4Q9BTZ2 278 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 ING2Q9H160 280 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 SLC6A20Q9NP91 592 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 TXLNGQ9NUQ3 528 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 SLC17A6Q9P2U8 582 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 NBASA2RRP1 2371 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 ANKRD12Q6UB98 2062 aa16.97■□□□□ 0.31
LSM5-204ENST00000409909 LOC105369274A0A096LPK9 316 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 LOC102723532A0A0G2JNH3 316 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 CCDC188H7C350 402 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 AHSGP02765 367 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 ENO3P13929 434 aaPredicted RBP16.96■□□□□ 0.31
LSM5-204ENST00000409909 ALAS2P22557 587 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 CARSP49589 748 aaKnown RBP16.96■□□□□ 0.31
LSM5-204ENST00000409909 ITGA8P53708 1063 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 PNLIPRP1P54315 467 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 VSX2P58304 361 aaPredicted RBP16.96■□□□□ 0.31
LSM5-204ENST00000409909 ARHGAP19Q14CB8 494 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 COLEC12Q5KU26 742 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 MRPL14Q6P1L8 145 aaKnown RBP16.96■□□□□ 0.31
LSM5-204ENST00000409909 FBXO42Q6P3S6 717 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 OR4N4Q8N0Y3 316 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 PDIK1LQ8N165 341 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 PPFIBP2Q8ND30 876 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 ZNF480Q8WV37 535 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 SMPDL3AQ92484 453 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 C17orf62Q9BQA9 187 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 DPH7Q9BTV6 452 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 IFT80Q9P2H3 777 aaPredicted RBP16.96■□□□□ 0.31
LSM5-204ENST00000409909 TEX264Q9Y6I9 313 aa16.96■□□□□ 0.31
LSM5-204ENST00000409909 TNRC6AQ8NDV7 1962 aaKnown RBP16.96■□□□□ 0.31
LSM5-204ENST00000409909 HEATR5BQ9P2D3 2071 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 IGKV1-8A0A0C4DH67 115 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 A0A0J9YVX5 310 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms