RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 B3GNT3Q9Y2A9 372 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 PCM1Q15154 2024 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 FITM1A5D6W6 292 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 CYSRT1A8MQ03 144 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 E5RI56 91 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 PHF2O75151 1096 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 MATN4O95460 622 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 ITGAXP20702 1163 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 MAGEA6P43360 314 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 KCNJ11Q14654 390 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 CASC4Q6P4E1 433 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 IGFL3Q6UXB1 125 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 MIPEPQ99797 713 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 LRRC4CQ9HCJ2 640 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 FAM114A2Q9NRY5 505 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 SLC22A11Q9NSA0 550 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 LUZP4Q9P127 313 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 NIPSNAP2O75323 286 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 CHRM3P20309 590 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 CMPK1P30085 196 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 CXCR5P32302 372 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 GPS1Q13098 491 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 GBX1Q14549 363 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 NKG7Q16617 165 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 TTLL9Q3SXZ7 439 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 ANKRD20A4Q4UJ75 823 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 IRAK1BP1Q5VVH5 260 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 CES3Q6UWW8 571 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 LRRC8AQ8IWT6 810 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 ZADH2Q8N4Q0 377 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 PRELID2Q8N945 189 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 PSMG3-AS1Q96PY0 264 aa14.12□□□□□ -0.15
CBX3-203ENST00000409747 ILKAPQ9H0C8 392 aaPredicted RBP14.12□□□□□ -0.15
CBX3-203ENST00000409747 INTS10Q9NVR2 710 aaKnown RBP14.12□□□□□ -0.15
CBX3-203ENST00000409747 RUVBL2Q9Y230 463 aaKnown RBP14.12□□□□□ -0.15
CBX3-203ENST00000409747 USP9XQ93008 2570 aaPredicted RBP14.11□□□□□ -0.15
CBX3-203ENST00000409747 CCDC88CQ9P219 2028 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 TCRBV7S3A2A0A539 114 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 MAGEB16A2A368 324 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 BLACEA4D250 179 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 ZNF839A8K0R7 811 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 GOLGA8KD6RF30 607 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 GOLGA8TH3BQL2 631 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 CTSVO60911 334 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 CATP04040 527 aaKnown RBP14.11□□□□□ -0.15
CBX3-203ENST00000409747 ERVK-10P10266 1014 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 MLNP12872 115 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 MCM3P25205 808 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 PSMB5P28074 263 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 HSD17B2P37059 387 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 VSX2P58304 361 aaPredicted RBP14.11□□□□□ -0.15
CBX3-203ENST00000409747 ARHGAP19Q14CB8 494 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 CCSMST1Q4G0I0 132 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 WASHC2DQ5SRD0 308 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 PRMT9Q6P2P2 845 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 RNF44Q7L0R7 432 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 CILP2Q8IUL8 1156 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 OR2A1Q8NGT9 310 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 OR9A1PQ8NGU1 263 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 SPSB2Q99619 263 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 ZNF552Q9H707 407 aaPredicted RBP14.11□□□□□ -0.15
CBX3-203ENST00000409747 XAB2Q9HCS7 855 aaKnown RBP14.11□□□□□ -0.15
CBX3-203ENST00000409747 SEMA3GQ9NS98 782 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 CUEDC1Q9NWM3 386 aaPredicted RBP14.11□□□□□ -0.15
CBX3-203ENST00000409747 UTP6Q9NYH9 597 aaKnown RBP14.11□□□□□ -0.15
CBX3-203ENST00000409747 FBXL4Q9UKA2 621 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 CRYL1Q9Y2S2 319 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 NAV2Q8IVL1 2488 aa14.11□□□□□ -0.15
CBX3-203ENST00000409747 USP9YO00507 2555 aaPredicted RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 HYKKA2RU49 373 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 VPS26AO75436 327 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 KRT14P02533 472 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 ERGP11308 486 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 PKMP14618 531 aaKnown RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 ITGA3P26006 1051 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 VPS41P49754 854 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 TRIP13Q15645 432 aaPredicted RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 PRR30Q53SZ7 412 aaPredicted RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 PRAMEF13Q5VWM6 474 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 NEPROQ6NW34 567 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 COX15Q7KZN9 410 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 SMPDL3AQ92484 453 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 NAP1L3Q99457 506 aaPredicted RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 ZFYVE21Q9BQ24 234 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 CCDC68Q9H2F9 335 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 SLC6A20Q9NP91 592 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 TSR3Q9UJK0 312 aaKnown RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 SHANK1Q9Y566 2161 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 ANKRD12Q6UB98 2062 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 RP1L1Q8IWN7 2480 aaPredicted RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 A0A0J9YVX5 310 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 FAM237BA0A1B0GVD1 139 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 A0A1W2PPV9 198 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 OR2A25A4D2G3 310 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 MYO1CO00159 1063 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 PSIP1O75475 530 aaKnown RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 USP1O94782 785 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 CCNDBP1O95273 360 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 RPA3P35244 121 aaPredicted RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 CARSP49589 748 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms