RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 KATNBL1Q9H079 304 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 NTN4Q9HB63 628 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SNTG1Q9NSN8 517 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 PAK1IP1Q9NWT1 392 aaPredicted RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 TRPM5Q9NZQ8 1165 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 TBC1D14Q9P2M4 693 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 RGS17Q9UGC6 210 aaPredicted RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 IL20RAQ9UHF4 553 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SNX6Q9UNH7 406 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 DOCK6Q96HP0 2047 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 LCHNA4D1U4 455 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 WWP2O00308 870 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 PLK4O00444 970 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 E2F3O00716 465 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 LRRTM2O43300 516 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 PRAMEF11O60813 436 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 EPN2O95208 641 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 KRT75O95678 551 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 FCER2P06734 321 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 TNNI3P19429 210 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 GADD45AP24522 165 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CTSOP43234 321 aaPredicted RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 CRISP3P54108 245 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 AIF1P55008 147 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ZNF846Q147U1 533 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 DEPDC1Q5TB30 811 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 LRRC66Q68CR7 880 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 SPATA19Q7Z5L4 167 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 RAB2BQ8WUD1 216 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 TTYH2Q9BSA4 534 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ARMC1Q9NVT9 282 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 TRPC4Q9UBN4 977 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 PAPPA2Q9BXP8 1791 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 GLYATL1P3A0A0U1RQE8 302 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ZNF487B1APH4 448 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 H3BSH0 61 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CLIC1O00299 241 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 TRBC1P01850 177 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 KLKB1P03952 638 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ALPLP05186 524 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 HSD17B1P14061 328 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ALDH7A1P49419 539 aaKnown RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 TIAL1Q01085 375 aaKnown RBP eCLIP8.11□□□□□ -1.11
SNX13-201ENST00000409076 MC1RQ01726 317 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 MOGQ16653 247 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 FAM110CQ1W6H9 321 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 LEXMQ3ZCV2 418 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CLLU1OSQ5K130 101 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CNTN4Q8IWV2 1026 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CMTM8Q8IZV2 173 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CADM3Q8N126 398 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 SLC34A3Q8N130 599 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CELF2-AS1Q8N7Q2 184 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 WDR36Q8NI36 951 aaKnown RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 RAB8BQ92930 207 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 SH3YL1Q96HL8 342 aaPredicted RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 RBM4BQ9BQ04 359 aaKnown RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 RBM4Q9BWF3 364 aaKnown RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 RNF38Q9H0F5 515 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 C1orf109Q9NX04 203 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 DNAJC27Q9NZQ0 273 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 DNAJB9Q9UBS3 223 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 DNMT3LQ9UJW3 386 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 FAM32AQ9Y421 112 aaKnown RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 MTMR11A4FU01 709 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 RTCAO00442 366 aaKnown RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 OR7A17O14581 309 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 COCHO43405 550 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ASNA1O43681 348 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 AP1G1O43747 822 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 SERPINI2O75830 405 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CCNKO75909 580 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CYP11A1P05108 521 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ANXA5P08758 320 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 RPL9P32969 192 aaKnown RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 ATP6V1E1P36543 226 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 KIR3DL1P43629 444 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ACADVLP49748 655 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 TUBA4AP68366 448 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 VLDLRP98155 873 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 INAVAQ3KP66 663 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 HECTD3Q5T447 861 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 TRMT11Q7Z4G4 463 aaKnown RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 PROSER1Q86XN7 944 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 TCAIMQ8N3R3 496 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ZBTB2Q8N680 514 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CYB5D2Q8WUJ1 264 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 ZUFSPQ96AP4 578 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 L3HYPDHQ96EM0 354 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 MS4A4AQ96JQ5 239 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 PPP3R2Q96LZ3 170 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 AASDHPPTQ9NRN7 309 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 SLC25A37Q9NYZ2 338 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 USE1Q9NZ43 259 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 MBD1Q9UIS9 605 aaPredicted RBP8.11□□□□□ -1.11
SNX13-201ENST00000409076 FBXO10Q9UK96 956 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 CLEC4EQ9ULY5 219 aa8.11□□□□□ -1.11
SNX13-201ENST00000409076 FAM92AA1XBS5 289 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms