RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 OSBPL7Q9BZF2 842 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CHMP1AQ9HD42 196 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ELOVL2Q9NXB9 296 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PRELID1Q9Y255 219 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 MROH1Q8NDA8 1641 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TRAPPC13A5PLN9 417 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 LRRN3E7EW58 273 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 AGPSO00116 658 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 EPHB6O15197 1021 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 LATO43561 262 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PRKCHP24723 683 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PEX2P28328 305 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PAFAH1B3Q15102 231 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PUS10Q3MIT2 529 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ARSHQ5FYA8 562 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 KIAA1324Q6UXG2 1013 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF550Q7Z398 422 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 OR2L3Q8NG85 312 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 OTUB2Q96DC9 234 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TCEAL4Q96EI5 215 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PYURFQ96I23 114 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 LRIG1Q96JA1 1093 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 BMFQ96LC9 184 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 RIPOR3Q96MK2 946 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PGLYRP2Q96PD5 576 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 GPR22Q99680 433 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 VRK1Q99986 396 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 BRINP2Q9C0B6 783 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 LRRN3Q9H3W5 708 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 TRPV4Q9HBA0 871 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 FOLH1BQ9HBA9 442 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PTTG3PQ9NZH4 202 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ABCD2Q9UBJ2 740 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 HCN4Q9Y3Q4 1203 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 CMAHPQ9Y471 501 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SPEF1Q9Y4P9 236 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 LCHNA4D1U4 455 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 HTR3EA5X5Y0 456 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 H0Y858 1186 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 H7C2Y5 167 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 TSPOAP1O95153 1857 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 GOT2P00505 430 aaKnown RBP5.96□□□□□ -1.45
SCN1A-203ENST00000409050 PTPN2P17706 415 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 CPN2P22792 545 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 HTR2AP28223 471 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 CORO1AP31146 461 aaKnown RBP5.96□□□□□ -1.45
SCN1A-203ENST00000409050 DGKGP49619 791 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 CDH13P55290 713 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 NFKB2Q00653 900 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 NOGQ13253 232 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 TOMM20Q15388 145 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 EIF2S3LQ2VIR3 472 aaKnown RBP5.96□□□□□ -1.45
SCN1A-203ENST00000409050 CDKL4Q5MAI5 379 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 KIAA1614Q5VZ46 1190 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 UNQ6126/PRO20091Q6UXV3 157 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 LINGO2Q7L985 606 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 HDDC3Q8N4P3 179 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 POLMQ9NP87 494 aaPredicted RBP5.96□□□□□ -1.45
SCN1A-203ENST00000409050 ZDHHC18Q9NUE0 388 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 TMPRSS11EQ9UL52 423 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 LIPT1Q9Y234 373 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 SPEF2Q9C093 1822 aa5.96□□□□□ -1.45
SCN1A-203ENST00000409050 ELOA3DA6NLF2 546 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-203ENST00000409050 PCDH7O60245 1069 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 NOBOXO60393 691 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 LATS1O95835 1130 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 MPC1LP0DKB6 136 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 IL7RP16871 459 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 ITGB5P18084 799 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 SLC5A3P53794 718 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 PHC1P78364 1004 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 CRADDP78560 199 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 CAP1Q01518 475 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 PPIGQ13427 754 aaKnown RBP eCLIP5.96□□□□□ -1.468e-7■■■□□ 15.7
SCN1A-203ENST00000409050 ELOA3BQ3SY89 546 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 KHDC1Q4VXA5 237 aaKnown RBP5.96□□□□□ -1.46
SCN1A-203ENST00000409050 CRB2Q5IJ48 1285 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 CXorf57Q6NSI4 855 aaKnown RBP5.96□□□□□ -1.46
SCN1A-203ENST00000409050 SLC30A6Q6NXT4 461 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 EPGNQ6UW88 154 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 TPGS1Q6ZTW0 290 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 GPR142Q7Z601 462 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 IFNL1Q8IU54 200 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 NPAS4Q8IUM7 802 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 ELOA3Q8NG57 546 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 OR2L5Q8NG80 312 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 ITFG2Q969R8 447 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 FAM129BQ96TA1 746 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 KXD1Q9BQD3 176 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 MRPL45Q9BRJ2 306 aaKnown RBP5.96□□□□□ -1.46
SCN1A-203ENST00000409050 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-203ENST00000409050 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-203ENST00000409050 EIF3KQ9UBQ5 218 aaKnown RBP5.96□□□□□ -1.46
SCN1A-203ENST00000409050 C19orf25Q9UFG5 118 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-203ENST00000409050 MAU2Q9Y6X3 613 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 C3P01024 1663 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 A0A1W2PQH9 124 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 ARPC2O15144 300 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 PEX14O75381 377 aa5.96□□□□□ -1.46
SCN1A-203ENST00000409050 INMTO95050 263 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms