RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 KCNK12Q9HB15 430 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 SNX7Q9UNH6 387 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 CABIN1Q9Y6J0 2220 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 FAM220BPB1ANY3 271 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 SLC16A8O95907 504 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 KLK1P06870 262 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 C1SP09871 688 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 SHMT2P34897 504 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 P2RY2P41231 377 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 DGKQP52824 942 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 RPS13P62277 151 aaKnown RBP8.84□□□□□ -0.99
LIG4-202ENST00000405925 SLC9A5Q14940 896 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 MACC1Q6ZN28 852 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 LRRC74BQ6ZQY2 392 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 SLC9B2Q86UD5 537 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 GLB1L3Q8NCI6 653 aaPredicted RBP8.84□□□□□ -0.99
LIG4-202ENST00000405925 OR9Q1Q8NGQ5 310 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 ADAMTS15Q8TE58 950 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 SLC9A6Q92581 669 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 FGF14Q92915 247 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 ELSPBP1Q96BH3 223 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 PTERQ96BW5 349 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 RPS6KA6Q9UK32 745 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 MAP4K5Q9Y4K4 846 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 DGKBQ9Y6T7 804 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 HNRNPRO43390 633 aaKnown RBP8.84□□□□□ -0.99
LIG4-202ENST00000405925 HS6ST1O60243 411 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 SDC3O75056 442 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 ATP6V1B1P15313 513 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 GCKP35557 465 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 HSPA13P48723 471 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 SEPHS1P49903 392 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 LPAL2Q16609 132 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 RINLQ6ZS11 566 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 AMIGO2Q86SJ2 522 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 AVL9Q8NBF6 648 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 AGAP11Q8TF27 550 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 RBM18Q96H35 190 aaKnown RBP8.84□□□□□ -0.99
LIG4-202ENST00000405925 DUSP26Q9BV47 211 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 THAP10Q9P2Z0 257 aaPredicted RBP8.84□□□□□ -0.99
LIG4-202ENST00000405925 DKK3Q9UBP4 350 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 RAPGEFL1Q9UHV5 662 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 ACADSP16219 412 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 MAGEA3P43357 314 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 POLE2P56282 527 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 LIPEQ05469 1076 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 ICE2Q659A1 982 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 SPESP1Q6UW49 350 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 Q6ZNB5 142 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 SYVN1Q86TM6 617 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 FBXW8Q8N3Y1 598 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 Q8N9G6 341 aaPredicted RBP8.84□□□□□ -0.99
LIG4-202ENST00000405925 SETD7Q8WTS6 366 aaKnown RBP8.84□□□□□ -0.99
LIG4-202ENST00000405925 FATE1Q969F0 183 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 APOOQ9BUR5 198 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 ATXN10Q9UBB4 475 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 PDE10AQ9Y233 779 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 CA5BQ9Y2D0 317 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 WASF2Q9Y6W5 498 aa8.84□□□□□ -0.99
LIG4-202ENST00000405925 MROH6A6NGR9 719 aa8.83□□□□□ -1
LIG4-202ENST00000405925 B3GALT2O43825 422 aa8.83□□□□□ -1
LIG4-202ENST00000405925 PRPS1L1P21108 318 aa8.83□□□□□ -1
LIG4-202ENST00000405925 RPS3P23396 243 aaKnown RBP eCLIP8.83□□□□□ -1
LIG4-202ENST00000405925 MAOBP27338 520 aa8.83□□□□□ -1
LIG4-202ENST00000405925 MTPNP58546 118 aa8.83□□□□□ -1
LIG4-202ENST00000405925 MCCD1P59942 119 aaPredicted RBP8.83□□□□□ -1
LIG4-202ENST00000405925 CDK3Q00526 305 aa8.83□□□□□ -1
LIG4-202ENST00000405925 SRSF11Q05519 484 aaKnown RBP8.83□□□□□ -1
LIG4-202ENST00000405925 NRF1Q16656 503 aa8.83□□□□□ -1
LIG4-202ENST00000405925 AADATQ8N5Z0 425 aa8.83□□□□□ -1
LIG4-202ENST00000405925 TTC29Q8NA56 475 aaPredicted RBP8.83□□□□□ -1
LIG4-202ENST00000405925 CMTM7Q96FZ5 175 aa8.83□□□□□ -1
LIG4-202ENST00000405925 MCCC1Q96RQ3 725 aaPredicted RBP8.83□□□□□ -1
LIG4-202ENST00000405925 SLC6A17Q9H1V8 727 aa8.83□□□□□ -1
LIG4-202ENST00000405925 ANKHQ9HCJ1 492 aa8.83□□□□□ -1
LIG4-202ENST00000405925 SCN3BQ9NY72 215 aa8.83□□□□□ -1
LIG4-202ENST00000405925 CNOT6Q9ULM6 557 aaKnown RBP8.83□□□□□ -1
LIG4-202ENST00000405925 OAS3Q9Y6K5 1087 aaKnown RBP8.83□□□□□ -1
LIG4-202ENST00000405925 PRSS21Q9Y6M0 314 aa8.83□□□□□ -1
LIG4-202ENST00000405925 FAM234BA2RU67 622 aa8.83□□□□□ -1
LIG4-202ENST00000405925 OR52A4PA6NMU1 304 aa8.83□□□□□ -1
LIG4-202ENST00000405925 H3BN98 237 aa8.83□□□□□ -1
LIG4-202ENST00000405925 SLC16A5O15375 505 aa8.83□□□□□ -1
LIG4-202ENST00000405925 IL6P05231 212 aa8.83□□□□□ -1
LIG4-202ENST00000405925 G6PDP11413 515 aa8.83□□□□□ -1
LIG4-202ENST00000405925 PTX3P26022 381 aaPredicted RBP8.83□□□□□ -1
LIG4-202ENST00000405925 GABRB3P28472 473 aa8.83□□□□□ -1
LIG4-202ENST00000405925 DIO3P55073 304 aa8.83□□□□□ -1
LIG4-202ENST00000405925 PPP1R3AQ16821 1122 aa8.83□□□□□ -1
LIG4-202ENST00000405925 C18orf21Q32NC0 220 aaPredicted RBP8.83□□□□□ -1
LIG4-202ENST00000405925 GLYATQ6IB77 296 aa8.83□□□□□ -1
LIG4-202ENST00000405925 DUS1LQ6P1R4 473 aaKnown RBP8.83□□□□□ -1
LIG4-202ENST00000405925 IYDQ6PHW0 289 aa8.83□□□□□ -1
LIG4-202ENST00000405925 EPGNQ6UW88 154 aa8.83□□□□□ -1
LIG4-202ENST00000405925 Q6ZSR6 202 aa8.83□□□□□ -1
LIG4-202ENST00000405925 OR10A6Q8NH74 314 aa8.83□□□□□ -1
LIG4-202ENST00000405925 MAPK15Q8TD08 544 aa8.83□□□□□ -1
LIG4-202ENST00000405925 RGMAQ96B86 450 aa8.83□□□□□ -1
LIG4-202ENST00000405925 DPYSL5Q9BPU6 564 aa8.83□□□□□ -1
LIG4-202ENST00000405925 SLC39A3Q9BRY0 314 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms