RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 DUSP4Q13115 394 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 STRADAQ7RTN6 431 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 ZNF101Q8IZC7 436 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 GPRC5AQ8NFJ5 357 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 ORAI2Q96SN7 254 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 ASB8Q9H765 288 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 TLR6Q9Y2C9 796 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 ARAP3Q8WWN8 1544 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.21□□□□□ -1.1
CHD8-201ENST00000399982 ANKRD33BA6NCL7 494 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 MEN1O00255 615 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 PRAF2O60831 178 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 RAB36O95755 333 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 HTR2BP41595 481 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 SPATA22Q8NHS9 363 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 CPNE2Q96FN4 548 aaPredicted RBP8.21□□□□□ -1.1
CHD8-201ENST00000399982 MAF1Q9H063 256 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 OR51V1Q9H2C8 321 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 SPON1Q9HCB6 807 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 ABCC13Q9NSE7 274 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 TMX2Q9Y320 296 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 A0A1W2PQ67 120 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 KRBOX1C9JBD0 128 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 TRAPPC6AO75865 159 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 PDYNP01213 254 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 GKN3PP0CG01 181 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 MPSTP25325 297 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 RYKP34925 604 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 EIPR1Q53HC9 387 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 ZNF781Q8N8C0 355 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 C7orf57Q8NEG2 295 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 LILRB4Q8NHJ6 448 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 RPLP0P6Q8NHW5 317 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 FUZQ9BT04 418 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 C12orf65Q9H3J6 166 aaKnown RBP8.21□□□□□ -1.1
CHD8-201ENST00000399982 BTRCQ9Y297 605 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 POLR3HQ9Y535 204 aaPredicted RBP8.21□□□□□ -1.1
CHD8-201ENST00000399982 FXYD6-FXYD2A0A087WZ82 144 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 C1QTNF3-AMACRE9PGA6 284 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 AMHP03971 560 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 LCKP06239 509 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 GSTM2P28161 218 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 PTGIRP43119 386 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 RAB5CP51148 216 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CLCN7P51798 805 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 NOMO3P69849 1222 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ADIGQ0VDE8 80 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 MLIPQ5VWP3 458 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 SLC22A10Q63ZE4 541 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 KCTD9Q7L273 389 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 PAQR7Q86WK9 346 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 UPF1Q92900 1129 aaKnown RBP eCLIP8.2□□□□□ -1.16e-10■■■■■ 33.3
CHD8-201ENST00000399982 MAELQ96JY0 434 aaKnown RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 MTMR9Q96QG7 549 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CCDC106Q9BWC9 280 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 FXYD6Q9H0Q3 95 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TIMM13Q9Y5L4 95 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 LOC100130705A0A1B0GUX0 176 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 K7EPI3 171 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ZNF3P17036 446 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 XRCC1P18887 633 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 AQP1P29972 269 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ERVK-8P63133 956 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 BTG3Q14201 252 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 MECRQ9BV79 373 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 C11orf16Q9NQ32 467 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TMEM45AQ9NWC5 275 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 UXTQ9UBK9 157 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 EXOSC1Q9Y3B2 195 aaKnown RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 TRBC1P01850 177 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ACVR2AP27037 513 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 GNRHRP30968 328 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CDKN2CP42773 168 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CTSOP43234 321 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 ALDH3B2P48448 385 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ZNF132P52740 706 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 GBX2P52951 348 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 HERV-K104P61576 105 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 OC90Q02509 493 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 RUNX2Q13950 521 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CBX2Q14781 532 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 GRM3Q14832 879 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 LRRN1Q6UXK5 716 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 TNS4Q8IZW8 715 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ARRDC4Q8NCT1 418 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 MEAF6Q9HAF1 191 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 IMP3Q9NV31 184 aaKnown RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 PCDH10Q9P2E7 1040 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 REV1Q9UBZ9 1251 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 NKX1-2Q9UD57 310 aaPredicted RBP8.2□□□□□ -1.1
CHD8-201ENST00000399982 POU2F3Q9UKI9 436 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 PCDHB11Q9Y5F2 797 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 SNX10Q9Y5X0 201 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 LCHNA4D1U4 455 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 LRRTM2O43300 516 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 IFNA10P01566 189 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 SLC35G4P0C7Q5 338 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 DNASE1P24855 282 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 ADH6P28332 368 aa8.2□□□□□ -1.1
CHD8-201ENST00000399982 CMPK1P30085 196 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms