RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 NUSAP1Q9BXS6 441 aaKnown RBP9.1□□□□□ -0.95
COL28A1-201ENST00000399429 NARFLQ9H6Q4 476 aa9.1□□□□□ -0.95
COL28A1-201ENST00000399429 AIG1Q9NVV5 245 aa9.1□□□□□ -0.95
COL28A1-201ENST00000399429 ARL15Q9NXU5 204 aa9.1□□□□□ -0.95
COL28A1-201ENST00000399429 PCDHGB3Q9Y5G1 929 aa9.1□□□□□ -0.95
COL28A1-201ENST00000399429 NRXN3Q9Y4C0 1643 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 A0A1W2PQL4 384 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 SLC12A8A0AV02 714 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 ARHGEF33A8MVX0 844 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 AKR7A2O43488 359 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 LIPAP38571 399 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 MAGEA3P43357 314 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 CREMQ03060 361 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 PTSQ03393 145 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 PRKCDQ05655 676 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 FAM219BQ5XKK7 198 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 CXorf57Q6NSI4 855 aaKnown RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 IDO2Q6ZQW0 420 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 MOB2Q70IA6 237 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 CLEC14AQ86T13 490 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 LGI4Q8N135 537 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 LSMEM1Q8N8F7 131 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 C9orf43Q8TAL5 461 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 SLC7A6Q92536 515 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 C17orf62Q9BQA9 187 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 UQCC2Q9BRT2 126 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 AMBRA1Q9C0C7 1298 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 GSTO2Q9H4Y5 243 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 TMPRSS11EQ9UL52 423 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 KCTD3Q9Y597 815 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 RRN3P2A6NIE6 340 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 FAM72CH0Y354 149 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 M0R129 80 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 SCAMP3O14828 347 aaKnown RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 ADAMDEC1O15204 470 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 GPR182O15218 404 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 RAMP2O60895 175 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 INHBBP09529 407 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 ARF4P18085 180 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 DNASE1P24855 282 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 PCSK1P29120 753 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 AXLP30530 894 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 BRCC3P46736 316 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 NOVP48745 357 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 C2orf80Q0P641 193 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 PTPRCAPQ14761 206 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 TAZQ16635 292 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 FAM72AQ5TYM5 149 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 NXNL2Q5VZ03 156 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 FAM72DQ6L9T8 149 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 FAM72BQ86X60 149 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 C2CD4AQ8NCU7 369 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 AGBL3Q8NEM8 1001 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 COQ8BQ96D53 544 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 FAM126AQ9BYI3 521 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 AGO3Q9H9G7 860 aaKnown RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 PAK6Q9NQU5 681 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 HCN2Q9UL51 889 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 EDARQ9UNE0 448 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 PCDHB5Q9Y5E4 795 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 OAS3Q9Y6K5 1087 aaKnown RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 METTL15A6NJ78 407 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 TREHO43280 583 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 APOL3O95236 402 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 PRKCGP05129 697 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 UBL4AP11441 157 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 HOXB6P17509 224 aaKnown RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 F8A1P23610 371 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 CSTF2P33240 577 aaKnown RBP eCLIP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 DDOSTP39656 456 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 IFITM2Q01629 132 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 SNTA1Q13424 505 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 TTLL9Q3SXZ7 439 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 IDNKQ5T6J7 187 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 LYPD8Q6UX82 237 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 VTCN1Q7Z7D3 282 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 OR4K2Q8NGD2 314 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 TSPEARQ8WU66 669 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 SLC35F5Q8WV83 523 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 HSH2DQ96JZ2 352 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 FCRL2Q96LA5 508 aaPredicted RBP9.09□□□□□ -0.95
COL28A1-201ENST00000399429 GOLGA2P5Q9HBQ8 144 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 RAD18Q9NS91 495 aa9.09□□□□□ -0.95
COL28A1-201ENST00000399429 OR1E1P30953 314 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 FAM189BP81408 668 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 EFEMP1Q12805 493 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 EIF2B5Q13144 721 aaKnown RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 MAD2L1BPQ15013 274 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-201ENST00000399429 SLC10A6Q3KNW5 377 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 UAP1L1Q3KQV9 507 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 GTDC1Q4AE62 458 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 TRNP1Q6NT89 227 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 PELI3Q8N2H9 469 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 OR13C4Q8NGS5 318 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 HASPINQ8TF76 798 aa9.08□□□□□ -0.96
COL28A1-201ENST00000399429 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms