RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FBXO15Q8NCQ5 510 aaPredicted RBP24.57■■□□□ 1.52
U2AF1-203ENST00000398137 DENND1AQ8TEH3 1009 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 NKD1Q969G9 470 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 UBXN10Q96LJ8 280 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 TGM7Q96PF1 710 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 RAB11FIP5Q9BXF6 653 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 PARVBQ9HBI1 364 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 SLC39A1Q9NY26 324 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.57■■□□□ 1.52
U2AF1-203ENST00000398137 KLHL3Q9UH77 587 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 BSNQ9UPA5 3926 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 MN1Q10571 1320 aaPredicted RBP24.57■■□□□ 1.52
U2AF1-203ENST00000398137 GSAPA4D1B5 854 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 CAPN5O15484 640 aaPredicted RBP24.56■■□□□ 1.52
U2AF1-203ENST00000398137 LTA4HP09960 611 aaKnown RBP24.56■■□□□ 1.52
U2AF1-203ENST00000398137 CD1DP15813 335 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 LINC00303Q3SY05 128 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 MANEAQ5SRI9 462 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 SBSNQ6UWP8 590 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 MBOAT1Q6ZNC8 495 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 CCDC91Q7Z6B0 441 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 CENPLQ8N0S6 344 aaPredicted RBP24.56■■□□□ 1.52
U2AF1-203ENST00000398137 RAB42Q8N4Z0 105 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 LINC01555Q8NAE3 123 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 MCOLN3Q8TDD5 553 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 ANKRD7Q92527 254 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 IGSF5Q9NSI5 407 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 EURLQ9NYK6 297 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 SPATA7Q9P0W8 599 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 PCDHGA4Q9Y5G9 962 aa24.56■■□□□ 1.52
U2AF1-203ENST00000398137 COL6A6A6NMZ7 2263 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 TLDC2A0PJX2 215 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 STMND1H3BQB6 276 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 CDH16O75309 829 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 C9P02748 559 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 CHRM5P08912 532 aaPredicted RBP24.55■■□□□ 1.52
U2AF1-203ENST00000398137 ATP6V0D1P61421 351 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 PRKAA1Q13131 559 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 BEND6Q5SZJ8 279 aaPredicted RBP24.55■■□□□ 1.52
U2AF1-203ENST00000398137 ADAMTSL2Q86TH1 951 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 FAM129CQ86XR2 697 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 PLXDC1Q8IUK5 500 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 OR2L8Q8NGY9 312 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 MZB1Q8WU39 189 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 PTERQ96BW5 349 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 NXNL1Q96CM4 212 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 APMAPQ9HDC9 416 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 SPHK1Q9NYA1 384 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 UTP6Q9NYH9 597 aaKnown RBP24.55■■□□□ 1.52
U2AF1-203ENST00000398137 OR6C2Q9NZP2 312 aa24.55■■□□□ 1.52
U2AF1-203ENST00000398137 GCN1Q92616 2671 aaKnown RBP24.54■■□□□ 1.52
U2AF1-203ENST00000398137 PABPN1LA6NDY0 278 aaKnown RBP24.54■■□□□ 1.52
U2AF1-203ENST00000398137 RFPL1O75677 317 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 SLC16A8O95907 504 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 SLC26A3P40879 764 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 MC2RQ01718 297 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 RASA2Q15283 850 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 PPP1R3AQ16821 1122 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 TIFABQ6ZNK6 161 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 FAM92BQ6ZTR7 304 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 CYP4X1Q8N118 509 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 EXD3Q8N9H8 876 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 NMRAL1Q9HBL8 299 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 PCMTD2Q9NV79 361 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 SIDT1Q9NXL6 827 aaKnown RBP24.54■■□□□ 1.52
U2AF1-203ENST00000398137 ACTR10Q9NZ32 417 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 EPHA6Q9UF33 1036 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 LNPEPQ9UIQ6 1025 aa24.54■■□□□ 1.52
U2AF1-203ENST00000398137 NOVA2Q9UNW9 492 aaKnown RBP24.54■■□□□ 1.52
U2AF1-203ENST00000398137 PIPSLA2A3N6 862 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 FOXO6A8MYZ6 492 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 ENO2P09104 434 aaPredicted RBP24.53■■□□□ 1.52
U2AF1-203ENST00000398137 ERGP11308 486 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 TFEBP19484 476 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 PEBP1P30086 187 aaKnown RBP24.53■■□□□ 1.52
U2AF1-203ENST00000398137 CYP4F2P78329 520 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 FASTKQ14296 549 aaKnown RBP24.53■■□□□ 1.52
U2AF1-203ENST00000398137 OR4D1Q15615 310 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 CYP2A13Q16696 494 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 FRA10AC1Q70Z53 315 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 ZNF480Q8WV37 535 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 ZDHHC12Q96GR4 267 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 CTRCQ99895 268 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 TRIM54Q9BYV2 358 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 RAB33BQ9H082 229 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 ALG9Q9H6U8 611 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 ARL15Q9NXU5 204 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 POMT2Q9UKY4 750 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 PCDHB11Q9Y5F2 797 aa24.53■■□□□ 1.52
U2AF1-203ENST00000398137 C2orf74A8MZ97 194 aa24.52■■□□□ 1.52
U2AF1-203ENST00000398137 MATN2O00339 956 aa24.52■■□□□ 1.52
U2AF1-203ENST00000398137 KIF1CO43896 1103 aaKnown RBP24.52■■□□□ 1.52
U2AF1-203ENST00000398137 GUCA1CO95843 209 aa24.52■■□□□ 1.52
U2AF1-203ENST00000398137 HIST1H2AGP0C0S8 130 aaPredicted RBP24.52■■□□□ 1.52
U2AF1-203ENST00000398137 KRT15P19012 456 aa24.52■■□□□ 1.52
U2AF1-203ENST00000398137 HIST1H2ADP20671 130 aa24.52■■□□□ 1.52
U2AF1-203ENST00000398137 KPNA2P52292 529 aaKnown RBP24.52■■□□□ 1.52
U2AF1-203ENST00000398137 PNLIPRP1P54315 467 aa24.52■■□□□ 1.52
U2AF1-203ENST00000398137 FAM83EQ2M2I3 478 aa24.52■■□□□ 1.52
U2AF1-203ENST00000398137 FBXO38Q6PIJ6 1188 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms