RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 LCTLQ6UWM7 567 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GLRX5Q86SX6 157 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 THOC6Q86W42 341 aaKnown RBP18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 DEFB124Q8NES8 71 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 SLC22A18Q96BI1 424 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 AHCYL2Q96HN2 611 aaKnown RBP18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 OR4K3Q96R72 315 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ERVK-6Q9BXR3 956 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PITPNM3Q9BZ71 974 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PCBD2Q9H0N5 130 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ABCG4Q9H172 646 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 LRRN3Q9H3W5 708 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 SLC32A1Q9H598 525 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 EPHA6Q9UF33 1036 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 SLC22A14Q9Y267 594 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PCDHB11Q9Y5F2 797 aa18.8■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GSAPA4D1B5 854 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 K7EPI3 171 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 E2F3O00716 465 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 SLC30A4O14863 429 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 CASC3O15234 703 aaKnown RBP18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 CCNT2O60583 730 aaKnown RBP18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 TRIM13O60858 407 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 RPLP0P05388 317 aaKnown RBP18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 CHN1P15882 459 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 UGT2B7P16662 529 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 CSRP1P21291 193 aaKnown RBP18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PSMB5P28074 263 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PPP1CAP62136 330 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ILKQ13418 452 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 TSTA3Q13630 321 aaPredicted RBP18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 UNC50Q53HI1 259 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ARMC6Q6NXE6 501 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 OR2A1Q8NGT9 310 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ZNF483Q8TF39 744 aaPredicted RBP18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 OR2A14Q96R47 310 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 MIPEPQ99797 713 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 DNAJC11Q9NVH1 559 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 OPTCQ9UBM4 332 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 TAC3Q9UHF0 121 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PCTPQ9UKL6 214 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 POMT2Q9UKY4 750 aa18.79■□□□□ 0.6
MAP1LC3A-203ENST00000397709 MN1Q10571 1320 aaPredicted RBP18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ISM1B1AKI9 464 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 NTN3O00634 580 aaPredicted RBP18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 FGF3P11487 239 aaPredicted RBP18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 NPPBP16860 134 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ASPHQ12797 758 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 TRIP6Q15654 476 aaKnown RBP18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 CLPPQ16740 277 aaPredicted RBP18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 SLC5A12Q1EHB4 618 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 THEMIS2Q5TEJ8 643 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 WDR74Q6RFH5 385 aaPredicted RBP18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 SPESP1Q6UW49 350 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 NUDCD3Q8IVD9 361 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 OR6Y1Q8NGX8 325 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 NCSTNQ92542 709 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PAIP2Q9BPZ3 127 aaKnown RBP18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 HAUS8Q9BT25 410 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GATA5Q9BWX5 397 aaPredicted RBP18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ABCF3Q9NUQ8 709 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 TOR4AQ9NXH8 423 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 FAM53CQ9NYF3 392 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PCDHGA1Q9Y5H4 931 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PCM1Q15154 2024 aa18.78■□□□□ 0.6
MAP1LC3A-203ENST00000397709 WDR91A4D1P6 747 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 CAPN5O15484 640 aaPredicted RBP18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 RFPL3O75679 317 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 FKBP9O95302 570 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 C9P02748 559 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 EPORP19235 508 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PRDX3P30048 256 aaKnown RBP18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PPM1FP49593 454 aaPredicted RBP18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 NAGLUP54802 743 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GFERP55789 205 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 CDC16Q13042 620 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GTF2H2Q13888 395 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PDK4Q16654 411 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ICE2Q659A1 982 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 IRGCQ6NXR0 463 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GTF2H2CQ6P1K8 395 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 USP53Q70EK8 1073 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GOLGA7Q7Z5G4 137 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ARFGAP2Q8N6H7 521 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 OR2L3Q8NG85 312 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 SREK1Q8WXA9 508 aaKnown RBP18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 MOCOSQ96EN8 888 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 NSUN5Q96P11 429 aaKnown RBP18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 NUDT22Q9BRQ3 303 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ACAT2Q9BWD1 397 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GSTO2Q9H4Y5 243 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 ACSS2Q9NR19 701 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 GPRC5BQ9NZH0 403 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 SH2B3Q9UQQ2 575 aa18.77■□□□□ 0.6
MAP1LC3A-203ENST00000397709 PCNX2A6NKB5 2137 aa18.76■□□□□ 0.59
MAP1LC3A-203ENST00000397709 SUPT7LO94864 414 aa18.76■□□□□ 0.59
MAP1LC3A-203ENST00000397709 CCNDBP1O95273 360 aa18.76■□□□□ 0.59
MAP1LC3A-203ENST00000397709 CPNE6O95741 557 aa18.76■□□□□ 0.59
MAP1LC3A-203ENST00000397709 EPB42P16452 691 aa18.76■□□□□ 0.59
MAP1LC3A-203ENST00000397709 LSSP48449 732 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms