RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ZNF839A8K0R7 811 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 YY2O15391 372 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 CRCPO75575 148 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 PIAS2O75928 621 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 CHIT1Q13231 466 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 E2F2Q14209 437 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 ALYREFQ86V81 257 aaKnown RBP26.59■■□□□ 1.85
CPNE1-203ENST00000397442 SETD7Q8WTS6 366 aaKnown RBP26.59■■□□□ 1.85
CPNE1-203ENST00000397442 ZDHHC1Q8WTX9 485 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 SMPDL3AQ92484 453 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 PIGKQ92643 395 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 C3orf30Q96M34 536 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 MIPEPQ99797 713 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 CPNE7Q9UBL6 633 aa26.59■■□□□ 1.85
CPNE1-203ENST00000397442 LAMA1P25391 3075 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 GOLGA8QA0A0J9YX86 632 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 GOLGA8OA6NCC3 632 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 GOLGA8NF8WBI6 632 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 PIP5K1BO14986 540 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 AQP9O43315 295 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 CD22P20273 847 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 PRAMEF13Q5VWM6 474 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 LCTLQ6UWM7 567 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 GKN2Q86XP6 184 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 RAB42Q8N4Z0 105 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 JPH3Q8WXH2 748 aaPredicted RBP26.58■■□□□ 1.85
CPNE1-203ENST00000397442 C19orf60Q96EN9 201 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 POT1Q9NUX5 634 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 UCKL1Q9NWZ5 548 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 APOBEC2Q9Y235 224 aaKnown RBP26.58■■□□□ 1.85
CPNE1-203ENST00000397442 BTRCQ9Y297 605 aa26.58■■□□□ 1.85
CPNE1-203ENST00000397442 UGDHO60701 494 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 SDC3O75056 442 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 GNAZP19086 355 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 HTR6P50406 440 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 SIM2Q14190 667 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-203ENST00000397442 SLCO4C1Q6ZQN7 724 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 CHCHD4Q8N4Q1 142 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 RILPQ96NA2 401 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 PCDHGA2Q9Y5H1 932 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 LMO7DNF2Z398 122 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 SLC2A4P14672 509 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 IRF8Q02556 426 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 DOC2AQ14183 400 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 MYLK4Q86YV6 388 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-203ENST00000397442 SDR16C5Q8N3Y7 309 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 ZFPM2Q8WW38 1151 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 SLC29A3Q9BZD2 475 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 TCF7L2Q9NQB0 619 aa26.57■■□□□ 1.84
CPNE1-203ENST00000397442 B4DGG1 531 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 FFAR3O14843 346 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 CLGNO14967 610 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 GPR42O15529 346 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 VIPP01282 170 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 PSMB5P28074 263 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 CASP2P42575 452 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 YBX1P67809 324 aaKnown RBP26.56■■□□□ 1.84
CPNE1-203ENST00000397442 GPR18Q14330 331 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 SHBQ15464 509 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 LSM12Q3MHD2 195 aaKnown RBP26.56■■□□□ 1.84
CPNE1-203ENST00000397442 XKR6Q5GH73 641 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 THEMIS2Q5TEJ8 643 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 LIPJQ5W064 366 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 TRIM48Q8IWZ4 208 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 LCN9Q8WX39 176 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 TWSG1Q9GZX9 223 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 TAC3Q9UHF0 121 aa26.56■■□□□ 1.84
CPNE1-203ENST00000397442 WDFY4Q6ZS81 3184 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 HGSO14964 777 aaPredicted RBP26.55■■□□□ 1.84
CPNE1-203ENST00000397442 PRICKLE3O43900 615 aaPredicted RBP26.55■■□□□ 1.84
CPNE1-203ENST00000397442 KDM1AO60341 852 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 CHEK2O96017 543 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 LINC00032P0C843 101 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 JUPP14923 745 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 HMOX2P30519 316 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 SHMT2P34897 504 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 CPSF6Q16630 551 aaKnown RBP eCLIP26.55■■□□□ 1.84
CPNE1-203ENST00000397442 CATSPEREQ5SY80 951 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 EFL1Q7Z2Z2 1120 aaKnown RBP26.55■■□□□ 1.84
CPNE1-203ENST00000397442 MTDHQ86UE4 582 aaKnown RBP26.55■■□□□ 1.84
CPNE1-203ENST00000397442 AMIGO1Q86WK6 493 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 FITM2Q8N6M3 262 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 WDR34Q96EX3 536 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 ELF4Q99607 663 aaPredicted RBP26.55■■□□□ 1.84
CPNE1-203ENST00000397442 HAUS8Q9BT25 410 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 ACAT2Q9BWD1 397 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 DYRK1BQ9Y463 629 aa26.55■■□□□ 1.84
CPNE1-203ENST00000397442 EBAG9O00559 213 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 VARSP26640 1264 aaKnown RBP26.54■■□□□ 1.84
CPNE1-203ENST00000397442 PEBP1P30086 187 aaKnown RBP26.54■■□□□ 1.84
CPNE1-203ENST00000397442 HOXD12P35452 270 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 RXRGP48443 463 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 TBCCQ15814 346 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 ZSCAN26Q16670 478 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 XKR7Q5GH72 579 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 SCIMPQ6UWF3 145 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 DDIASQ8IXT1 998 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 OR4E2Q8NGC2 313 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 OR2A1Q8NGT9 310 aa26.54■■□□□ 1.84
CPNE1-203ENST00000397442 ACTRT2Q8TDY3 377 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms