RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 Q5BKY6 102 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 KCTD11Q693B1 232 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 BRAT1Q6PJG6 821 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 AHSA2Q719I0 299 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 LUZP2Q86TE4 346 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 NT5DC4Q86YG4 428 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 SLC22A15Q8IZD6 547 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 LINC00518Q8N0U6 118 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 OR8H3Q8N146 312 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 CHCHD4Q8N4Q1 142 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 DTWD1Q8N5C7 304 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 TTC29Q8NA56 475 aaPredicted RBP9.65□□□□□ -0.86
APTX-207ENST00000397172 KCT2Q8NC54 265 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 UBA3Q8TBC4 463 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 ZNF675Q8TD23 568 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 AKAP1Q92667 903 aaKnown RBP eCLIP9.65□□□□□ -0.86
APTX-207ENST00000397172 PHF21BQ96EK2 531 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 TMEM209Q96SK2 561 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 NT5C1AQ9BXI3 368 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 SLC52A3Q9NQ40 469 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 WASH6PQ9NQA3 447 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 NDFIP2Q9NV92 336 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 DNAJC15Q9Y5T4 150 aa9.65□□□□□ -0.86
APTX-207ENST00000397172 ELOVL7A1L3X0 281 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 MYL12BO14950 172 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 MUSKO15146 869 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 HCN1O60741 890 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 TNFRSF21O75509 655 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 GRAP2O75791 330 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 ANXA9O76027 345 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 CXCL10P02778 98 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 LCKP06239 509 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 MYL12AP19105 171 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 ITGB8P26012 769 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 PTPN3P26045 913 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 NMBRP28336 390 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 TNFSF8P32971 234 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 CYP2C18P33260 490 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 RFX2P48378 723 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 SCNN1GP51170 649 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 CRYBB1P53674 252 aaPredicted RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 DAB2P98082 770 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 ZNF33AQ06730 810 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 RIN1Q13671 783 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 CAMK1Q14012 370 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 PCBP1Q15365 356 aaKnown RBP eCLIP9.65□□□□□ -0.87
APTX-207ENST00000397172 GRK1Q15835 563 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 SLC14A2Q15849 920 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 KYAT1Q16773 422 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 SYT16Q17RD7 645 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 PYCR3Q53H96 274 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 CLLU1Q5K131 121 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 CERCAMQ5T4B2 595 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 LRRC66Q68CR7 880 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 KIAA0930Q6ICG6 404 aaPredicted RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 COMMD7Q86VX2 200 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 ZFAND4Q86XD8 727 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 PHYKPLQ8IUZ5 450 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 CEP97Q8IW35 865 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.65□□□□□ -0.87
APTX-207ENST00000397172 C1orf52Q8N6N3 182 aaKnown RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 NAT16Q8N8M0 369 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 C19orf18Q8NEA5 215 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 FBXO30Q8TB52 745 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 TMEM143Q96AN5 459 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 ISG20Q96AZ6 181 aaKnown RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 PDXPQ96GD0 296 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 ZC3HAV1LQ96H79 300 aaKnown RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 ZBTB45Q96K62 511 aaPredicted RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 RAD9AQ99638 391 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 NFKBIZQ9BYH8 718 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 FAM105AQ9NUU6 356 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 TSPAN16Q9UKR8 245 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 ELF5Q9UKW6 265 aaPredicted RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 NDRG4Q9ULP0 352 aaKnown RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 FZD10Q9ULW2 581 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 SAMD4AQ9UPU9 718 aaKnown RBP9.65□□□□□ -0.87
APTX-207ENST00000397172 CMAHPQ9Y471 501 aa9.65□□□□□ -0.87
APTX-207ENST00000397172 ZFC3H1O60293 1989 aaKnown RBP9.64□□□□□ -0.87
APTX-207ENST00000397172 B4DXG7 233 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 MEN1O00255 615 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 CXCR6O00574 342 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 SEC14L5O43304 696 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 B3GALNT1O75752 331 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 MLYCDO95822 493 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 MT-CO1P00395 513 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 VTNP04004 478 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 CDK1P06493 297 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 HMBSP08397 361 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 PCSK2P16519 638 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 GOT1P17174 413 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 NPR3P17342 541 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 RAB3AP20336 220 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 FPR1P21462 350 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 HLA-FP30511 346 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 DNAJA1P31689 397 aaKnown RBP9.64□□□□□ -0.87
APTX-207ENST00000397172 RECQLP46063 649 aaPredicted RBP9.64□□□□□ -0.87
APTX-207ENST00000397172 CCT3P49368 545 aaKnown RBP9.64□□□□□ -0.87
APTX-207ENST00000397172 RGS6P49758 472 aa9.64□□□□□ -0.87
APTX-207ENST00000397172 GBX2P52951 348 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms