RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SLC5A6Q9Y289 635 aa13.25□□□□□ -0.29
SEC13-205ENST00000397101 NFS1Q9Y697 457 aa13.25□□□□□ -0.29
SEC13-205ENST00000397101 FBN2P35556 2912 aa13.25□□□□□ -0.29
SEC13-205ENST00000397101 FAM95CA0A1B0GW59 222 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 ARGFXA6NJG6 315 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 E5RI56 91 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 PRMT5O14744 637 aaPredicted RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 CDK14O94921 469 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 TIAF1O95411 115 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 C1QAP02745 245 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 OR56A5P0C7T3 313 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 ATP1B2P14415 290 aaPredicted RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 ZNF8P17098 575 aaPredicted RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 CHRM3P20309 590 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 CNTFP26441 200 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 TMEM115Q12893 351 aaPredicted RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 GPS2Q13227 327 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 USP10Q14694 798 aaKnown RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 AGAP9Q5VTM2 703 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 C1QL3Q5VWW1 255 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 PWWP2BQ6NUJ5 590 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 ZC3HC1Q86WB0 502 aaKnown RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 KMT5CQ86Y97 462 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 RIBC1Q8N443 379 aaPredicted RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 RBMXL3Q8N7X1 1067 aaKnown RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 DDHD1Q8NEL9 900 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 ADAMTS17Q8TE56 1095 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 LPGAT1Q92604 370 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 RSC1A1Q92681 617 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 VPS39Q96JC1 886 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 C5orf34Q96MH7 638 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 LRFN5Q96NI6 719 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 NDNQ99608 321 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 TIMM29Q9BSF4 260 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 TMEM109Q9BVC6 243 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 TSSK1BQ9BXA7 367 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 OR2AG1Q9H205 316 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 TRIM39Q9HCM9 518 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 SLC40A1Q9NP59 571 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 KLC4Q9NSK0 619 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 ZNF446Q9NWS9 450 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 ATXN10Q9UBB4 475 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 CTNNAL1Q9UBT7 734 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 ZNF180Q9UJW8 692 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 TMPRSS11EQ9UL52 423 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 SLC39A10Q9ULF5 831 aa13.24□□□□□ -0.29
SEC13-205ENST00000397101 MTO1Q9Y2Z2 717 aaKnown RBP13.24□□□□□ -0.29
SEC13-205ENST00000397101 TNRC6AQ8NDV7 1962 aaKnown RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 AGAP14A8MT82 685 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 TRIM49D1C9J1S8 452 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 H3BMM5 538 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 MAP2K7O14733 419 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 ATP8B1O43520 1251 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 KIF1CO43896 1103 aaKnown RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 CPNE3O75131 537 aaKnown RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 CBX6O95503 412 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 PKMP14618 531 aaKnown RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 GABRB3P28472 473 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 GCAP28676 217 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 ATP5DP30049 168 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 TUBB3Q13509 450 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 IL10RAQ13651 578 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 PRR30Q53SZ7 412 aaPredicted RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 HECTD2Q5U5R9 776 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 SLC6A19Q695T7 634 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 FAM45BPQ6NSW5 357 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 TMEM220Q6QAJ8 160 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 RAPH1Q70E73 1250 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 GALNT7Q86SF2 657 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 TDRPQ86YL5 185 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 SIDT2Q8NBJ9 832 aaKnown RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 FAM45AQ8TCE6 357 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 NAT14Q8WUY8 206 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 MTBPQ96DY7 904 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 ZNF514Q96K75 400 aaPredicted RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 SMAD5Q99717 465 aaKnown RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 AARSD1Q9BTE6 412 aaKnown RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 STMN4Q9H169 189 aaPredicted RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 AKIRIN1Q9H9L7 192 aaPredicted RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 C5AR2Q9P296 337 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 CORO1CQ9ULV4 474 aaPredicted RBP13.23□□□□□ -0.29
SEC13-205ENST00000397101 COMMD10Q9Y6G5 202 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 CSMD2Q7Z408 3487 aa13.23□□□□□ -0.29
SEC13-205ENST00000397101 ZFHX3Q15911 3703 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 OTOGQ6ZRI0 2925 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 OR2AG2A6NM03 316 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 QSOX1O00391 747 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 KMOO15229 486 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 VEGFDO43915 354 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 VPS26AO75436 327 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 SASH3O75995 380 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 AP2A2O94973 939 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 ESR1P03372 595 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 POU3F2P20265 443 aaPredicted RBP13.22□□□□□ -0.29
SEC13-205ENST00000397101 RPS3P23396 243 aaKnown RBP eCLIP13.22□□□□□ -0.298e-23■■□□□ 13.5
SEC13-205ENST00000397101 TYK2P29597 1187 aa13.22□□□□□ -0.29
SEC13-205ENST00000397101 PBLDP30039 288 aaPredicted RBP13.22□□□□□ -0.29
SEC13-205ENST00000397101 RPS18P62269 152 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 381.1 ms