RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 TRMT13Q9NUP7 481 aaKnown RBP23.4■■□□□ 1.34
CSNK1E-203ENST00000396832 VPS4AQ9UN37 437 aa23.4■■□□□ 1.34
CSNK1E-203ENST00000396832 WBP11Q9Y2W2 641 aaKnown RBP23.4■■□□□ 1.34
CSNK1E-203ENST00000396832 CENPXA8MT69 81 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 DNTTP04053 509 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 GTF2H2Q13888 395 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 GTF2H2CQ6P1K8 395 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 ZDHHC21Q8IVQ6 265 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 TRIB3Q96RU7 358 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 SEPT5Q99719 369 aaPredicted RBP23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 TMEM246Q9BRR3 403 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 NXF2Q9GZY0 626 aaKnown RBP23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 WDR70Q9NW82 654 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 SNX6Q9UNH7 406 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 ERVW-1Q9UQF0 538 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 CARD8Q9Y2G2 431 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 A3GALT2U3KPV4 340 aa23.39■■□□□ 1.34
CSNK1E-203ENST00000396832 A8MV72 311 aaPredicted RBP23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 CBX4O00257 560 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 MRPS14O60783 128 aaKnown RBP23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 AKT1P31749 480 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 CTSKP43235 329 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 NXNL2Q5VZ03 156 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 UBQLNLQ8IYU4 475 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 DMRTB1Q96MA1 342 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 ZNF382Q96SR6 550 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 EGFL8Q99944 293 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 RNF167Q9H6Y7 350 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 NDRG4Q9ULP0 352 aaKnown RBP23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 ANGPTL3Q9Y5C1 460 aa23.39■■□□□ 1.33
CSNK1E-203ENST00000396832 M0R082 166 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 AP3D1O14617 1153 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 KLK8O60259 260 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 LDLRAD1Q5T700 205 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 KDM4DQ6B0I6 523 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 ZCCHC8Q6NZY4 707 aaKnown RBP23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 IPCEF1Q8WWN9 437 aaPredicted RBP23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 SCML2Q9UQR0 700 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 COL4A4P53420 1690 aaPredicted RBP23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 LOC100506127A0A0U1RQW1 187 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 C2orf81A6NN90 581 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 EVPLLA8MZ36 301 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 RECQL5O94762 991 aaPredicted RBP23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 ZNF682O95780 498 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 EFNA1P20827 205 aaPredicted RBP23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 OR1G1P47890 313 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 NRIP1P48552 1158 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 TSPYL5Q86VY4 417 aaPredicted RBP23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 GALNT12Q8IXK2 581 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 ZBTB18Q99592 522 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 SH3GL1Q99961 368 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 TM9SF3Q9HD45 589 aa23.38■■□□□ 1.33
CSNK1E-203ENST00000396832 ARHGDIAP52565 204 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 PARP15Q460N3 678 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 SOWAHCQ53LP3 525 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 RUNDC3AQ59EK9 446 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 SNAP47Q5SQN1 464 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 CLDN19Q8N6F1 224 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 KATNAL1Q9BW62 490 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 C14orf119Q9NWQ9 140 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 WBP4O75554 376 aaKnown RBP23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 PRAMEF12O95522 483 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 PRLP01236 227 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 HOXD9P28356 352 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 SLC6A4P31645 630 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 TWF1Q12792 350 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 CCDC71Q8IV32 467 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 BEND7Q8N7W2 519 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 GTF3C2Q8WUA4 911 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 SUSD3Q96L08 255 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 SIGLEC11Q96RL6 698 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 DPY30Q9C005 99 aa23.37■■□□□ 1.33
CSNK1E-203ENST00000396832 IGLV3-10A0A075B6K4 115 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 A0A096LPI6 279 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 LRATO95237 230 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 CTPS1P17812 591 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 C21orf33P30042 268 aaPredicted RBP23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 BOCQ9BWV1 1114 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 ABCG2Q9UNQ0 655 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 PDE4DIPQ5VU43 2346 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 A8MX80 341 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 STX7O15400 261 aaKnown RBP23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 SEC22BO75396 215 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 HOXA9P31269 272 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 GRK5P34947 590 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 CREMQ03060 361 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 TIGD6Q17RP2 521 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 SUSD1Q6UWL2 747 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 RFPL4BQ6ZWI9 263 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 C16orf59Q7L2K0 433 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 OR6K2Q8NGY2 324 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 BHMTQ93088 406 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 OR52E6Q96RD3 313 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 GABARAPL1Q9H0R8 117 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 PDFQ9HBH1 243 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 MKLN1Q9UL63 735 aa23.36■■□□□ 1.33
CSNK1E-203ENST00000396832 hCG_2039718K7EN88 272 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 PCDHGA12O60330 932 aa23.35■■□□□ 1.33
CSNK1E-203ENST00000396832 PGRP06401 933 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms