RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 POLE4Q9NR33 117 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CFAP97Q9P2B7 532 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 MAPRE3Q9UPY8 281 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ANKRD12Q6UB98 2062 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 NT5C1B-RDH14C9J2C7 533 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CCRL2O00421 344 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PRMT5O14744 637 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 PMPCBO75439 489 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PSIP1O75475 530 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 MAP3K6O95382 1288 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ADH1CP00326 375 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ABCB1P08183 1280 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 PRKACBP22694 351 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 KRT6CP48668 564 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SPINT3P49223 89 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 AP1S2P56377 157 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ADARB1P78563 741 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 PTSQ03393 145 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 RAD51Q06609 339 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 OLIG2Q13516 323 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 DNASE1L3Q13609 305 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 DLG2Q15700 870 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZNF805Q5CZA5 627 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 RBM20Q5T481 1227 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 TMEM198Q66K66 360 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SULT1C3Q6IMI6 304 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CRTC1Q6UUV9 634 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 GPR155Q7Z3F1 870 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 AKAP14Q86UN6 197 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ATCAYQ86WG3 371 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS41-203ENST00000395969 SLC38A6Q8IZM9 456 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 APCDD1Q8J025 514 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 MINDY1Q8N5J2 469 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SPERTQ8NA61 448 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 OR2T34Q8NGX1 318 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 OR2T3Q8NH03 318 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 FAM110BQ8TC76 370 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SH3RF2Q8TEC5 729 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ANKRD49Q8WVL7 239 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CANT1Q8WVQ1 401 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PMEPA1Q969W9 287 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.22□□□□□ -1.571e-6■■■■□ 20.6
VPS41-203ENST00000395969 NXNL1Q96CM4 212 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 MRPL38Q96DV4 380 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 SLC45A3Q96JT2 553 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PPP1R36Q96LQ0 422 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TBATAQ96M53 351 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TSNARE1Q96NA8 513 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 GDF15Q99988 308 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 C9orf16Q9BUW7 83 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 LHPPQ9H008 270 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 NT5DC2Q9H857 520 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 FANCEQ9HB96 536 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TRIM39Q9HCM9 518 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SPAG4Q9NPE6 437 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 IL26Q9NPH9 171 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZNF358Q9NW07 568 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CACNA2D2Q9NY47 1150 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ADA2Q9NZK5 511 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 IFT80Q9P2H3 777 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 SLC17A6Q9P2U8 582 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 XPR1Q9UBH6 696 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SLC25A13Q9UJS0 675 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SCML1Q9UN30 329 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 GPR34Q9UPC5 381 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 RUVBL2Q9Y230 463 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 CDYLQ9Y232 598 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ARL5AQ9Y689 179 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TAF4O00268 1085 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 USP12O75317 370 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 BCAS1O75363 584 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 VPS26AO75436 327 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ALX3O95076 343 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CHRNGP07510 517 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 C1SP09871 688 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 UROSP10746 265 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 UBL4AP11441 157 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZNF7P17097 686 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 BPIP17213 487 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 RPL17P18621 184 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 GSTM2P28161 218 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CD70P32970 193 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PRLHRP49683 370 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PLA2G16P53816 162 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 RAD23AP54725 363 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PHC1P78364 1004 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 OCA2Q04671 838 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 BCL2L1Q07817 233 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SELPLGQ14242 412 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 KIAA0040Q15053 153 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ARL13AQ5H913 290 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 UBE2UQ5VVX9 321 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 NEK5Q6P3R8 708 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CASC4Q6P4E1 433 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 LHFPL2Q6ZUX7 228 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ERN2Q76MJ5 926 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 TAS2R42Q7RTR8 314 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CMC1Q7Z7K0 106 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 FAM9CQ8IZT9 166 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms