RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HOMEZQ8IX15 550 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 NAGSQ8N159 534 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 L3MBTL4Q8NA19 623 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 OR2L8Q8NGY9 312 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 ZDHHC1Q8WTX9 485 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 PATE1Q8WXA2 126 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 CCT6BQ92526 530 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 NEIL2Q969S2 332 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 MAELQ96JY0 434 aaKnown RBP19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 ZC3H10Q96K80 434 aaKnown RBP19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 CCDC28BQ9BUN5 200 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 TUBB1Q9H4B7 451 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 PFDN4Q9NQP4 134 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 PILRBQ9UKJ0 227 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 ICKQ9UPZ9 632 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 KMT2EQ8IZD2 1858 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 BDP1A6H8Y1 2624 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 CCT8L1PA6NM43 557 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 FFAR3O14843 346 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 GPR42O15529 346 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 VIPP01282 170 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 LINC00032P0C843 101 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 SP9P0CG40 484 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 CPSF6Q16630 551 aaKnown RBP eCLIP19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 LSM12Q3MHD2 195 aaKnown RBP19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 LIPJQ5W064 366 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 LINC01555Q8NAE3 123 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 HAUS8Q9BT25 410 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 SLC29A3Q9BZD2 475 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 PCBD2Q9H0N5 130 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 ZFP69BQ9UJL9 534 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 PTGDR2Q9Y5Y4 395 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 ZDBF2Q9HCK1 2354 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 B4DGG1 531 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 AQP9O43315 295 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 PRAMEF4O60810 478 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 CCDC22O60826 627 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 WFS1O76024 890 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 SHMT2P34897 504 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 ANGPT1Q15389 498 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 PRAMEF9Q5VWM5 478 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 IL27RAQ6UWB1 636 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 TMPRSS11BQ86T26 416 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 FITM2Q8N6M3 262 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 ZNF548Q8NEK5 533 aaPredicted RBP19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 CEP70Q8NHQ1 597 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 HMGCLL1Q8TB92 370 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 LCN9Q8WX39 176 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 PIGKQ92643 395 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 C3orf30Q96M34 536 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 ERVMER34-1Q9H9K5 563 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 POT1Q9NUX5 634 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 CPNE7Q9UBL6 633 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 TAC3Q9UHF0 121 aa19.74■□□□□ 0.75
VCPKMT-202ENST00000395860 MUC3AQ02505 3323 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 ATP6AP2A0A1C7CYW4 349 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 E9PBE3 544 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 KLHL41O60662 606 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 ATP6AP2O75787 350 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 KRT6AP02538 564 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 KRT6BP04259 564 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 KRT6CP48668 564 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 HTR6P50406 440 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 PCDH1Q08174 1060 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 DOC2AQ14183 400 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 PLCL1Q15111 1095 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 KIF19Q2TAC6 998 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 SCIMPQ6UWF3 145 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 ACTRT2Q8TDY3 377 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 SLC37A2Q8TED4 501 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 SLC5A11Q8WWX8 675 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 JPH3Q8WXH2 748 aaPredicted RBP19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 ERP27Q96DN0 273 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 PRR11Q96HE9 360 aaPredicted RBP19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 CCT7Q99832 543 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 ACAT2Q9BWD1 397 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 MYLK2Q9H1R3 596 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 SLC40A1Q9NP59 571 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 TRIM33Q9UPN9 1127 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 SH2B3Q9UQQ2 575 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 SNX11Q9Y5W9 270 aa19.73■□□□□ 0.75
VCPKMT-202ENST00000395860 KCNE1BA0A087WTH5 132 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 FCHO1O14526 889 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 YY2O15391 372 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SDC3O75056 442 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 ULK1O75385 1050 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SERPINA6P08185 405 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 JUPP14923 745 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 CTSKP43235 329 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 METTL21CQ5VZV1 264 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SLC9B2Q86UD5 537 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 AMIGO1Q86WK6 493 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SYT12Q8IV01 421 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SFTPA2Q8IWL1 248 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SDR16C5Q8N3Y7 309 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SFRP1Q8N474 314 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 OR4E2Q8NGC2 313 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 ZFPM2Q8WW38 1151 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 NMUR2Q9GZQ4 415 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SNX6Q9UNH7 406 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms