RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PCBP2Q15366 365 aaKnown RBP eCLIP11.09□□□□□ -0.63
RTN1-203ENST00000395090 SYTL3Q4VX76 610 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 USP39Q53GS9 565 aaKnown RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 CFAP157Q5JU67 520 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 GKAP1Q5VSY0 366 aaPredicted RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 SULT1C3Q6IMI6 304 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 TTC23LQ6PF05 361 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 Q6ZSR6 202 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 FRMD7Q6ZUT3 714 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 UBE2R2Q712K3 238 aaPredicted RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 CRLF3Q8IUI8 442 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 FBXL6Q8N531 539 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 CCNYL1Q8N7R7 359 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 KLHL6Q8WZ60 621 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 RHBDF1Q96CC6 855 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 WDR92Q96MX6 357 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 TIMM29Q9BSF4 260 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 TRIM54Q9BYV2 358 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 ILKAPQ9H0C8 392 aaPredicted RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 GSTO2Q9H4Y5 243 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 FGF22Q9HCT0 170 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 TM7SF3Q9NS93 570 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 CD274Q9NZQ7 290 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 ACSL5Q9ULC5 683 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 SUFUQ9UMX1 484 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 TNPO3Q9Y5L0 923 aaKnown RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 TECTAO75443 2155 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 TAPBPO15533 448 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 SNX2O60749 519 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 SIX3O95343 332 aaPredicted RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 RPS17P08708 135 aaKnown RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 TDGF1P13385 188 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 CD27P26842 260 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 PBLDP30039 288 aaPredicted RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 RABIFP47224 123 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 ABRQ12979 859 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 CYP27C1Q4G0S4 372 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 TPRG1LQ5T0D9 272 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 SLC36A4Q6YBV0 504 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 FRA10AC1Q70Z53 315 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 GALNT13Q8IUC8 556 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 PIWIL2Q8TC59 973 aaKnown RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 MCOLN3Q8TDD5 553 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 PPP4R1Q8TF05 950 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 UBTD2Q8WUN7 234 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 EXT2Q93063 718 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 UHRF1Q96T88 793 aaPredicted RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 KCNK13Q9HB14 408 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 ACSS2Q9NR19 701 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 PRMT8Q9NR22 394 aaPredicted RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 UTP6Q9NYH9 597 aaKnown RBP11.09□□□□□ -0.63
RTN1-203ENST00000395090 KLHL14Q9P2G3 628 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 RAP2CQ9Y3L5 183 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 BDP1A6H8Y1 2624 aa11.09□□□□□ -0.63
RTN1-203ENST00000395090 PRSS38A1L453 326 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 SUPT7LO94864 414 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 HSPA4LO95757 839 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 CHRNGP07510 517 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 ANXA5P08758 320 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 HIST1H2AGP0C0S8 130 aaPredicted RBP11.08□□□□□ -0.64
RTN1-203ENST00000395090 H2AFB1P0C5Y9 115 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 H2AFB2P0C5Z0 115 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 HIST1H2ADP20671 130 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 EEF1DP29692 281 aaKnown RBP11.08□□□□□ -0.64
RTN1-203ENST00000395090 CCR10P46092 362 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 AGTR2P50052 363 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 HNMTP50135 292 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 CLCNKAP51800 687 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 OVGP1Q12889 678 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 PRKAA1Q13131 559 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 ZXDCQ2QGD7 858 aaPredicted RBP11.08□□□□□ -0.64
RTN1-203ENST00000395090 ANKS6Q68DC2 871 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 ENPP7Q6UWV6 458 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 CHST15Q7LFX5 561 aaPredicted RBP11.08□□□□□ -0.64
RTN1-203ENST00000395090 SPATA21Q7Z572 469 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 ANKS4BQ8N8V4 417 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 ZNF483Q8TF39 744 aaPredicted RBP11.08□□□□□ -0.64
RTN1-203ENST00000395090 SKA2Q8WVK7 121 aaPredicted RBP11.08□□□□□ -0.64
RTN1-203ENST00000395090 OR1E3Q8WZA6 343 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 COX4I2Q96KJ9 171 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 HIST1H2AHQ96KK5 128 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 FOPNLQ96NB1 174 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 HIST1H2AJQ99878 128 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 H2AFJQ9BTM1 129 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 ASPNQ9BXN1 380 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 ZDHHC5Q9C0B5 715 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 EML4Q9HC35 981 aaKnown RBP11.08□□□□□ -0.64
RTN1-203ENST00000395090 MRPL40Q9NQ50 206 aaKnown RBP11.08□□□□□ -0.64
RTN1-203ENST00000395090 FAM86C1Q9NVL1 165 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 PCTPQ9UKL6 214 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 DGKBQ9Y6T7 804 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 CACNA1IQ9P0X4 2223 aa11.08□□□□□ -0.64
RTN1-203ENST00000395090 SPTY2D1-AS1A0A0U1RR47 76 aa11.07□□□□□ -0.64
RTN1-203ENST00000395090 LRRC14BA6NHZ5 514 aa11.07□□□□□ -0.64
RTN1-203ENST00000395090 NCF1BA6NI72 391 aaPredicted RBP11.07□□□□□ -0.64
RTN1-203ENST00000395090 NCF1CA8MVU1 366 aaPredicted RBP11.07□□□□□ -0.64
RTN1-203ENST00000395090 ARHGEF33A8MVX0 844 aa11.07□□□□□ -0.64
RTN1-203ENST00000395090 E2F3O00716 465 aa11.07□□□□□ -0.64
RTN1-203ENST00000395090 UBFD1O14562 309 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms