RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 FAM234BA2RU67 622 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 PPEF2O14830 753 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 POP7O75817 140 aaKnown RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 PGRP06401 933 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 SEPHS1P49903 392 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 GDI2P50395 445 aaKnown RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 TSPAN5P62079 268 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 PDE12Q6L8Q7 609 aaKnown RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 SYVN1Q86TM6 617 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 CBR4Q8N4T8 237 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 TBC1D24Q9ULP9 559 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 PPM1HQ9ULR3 514 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 LEFTY2O00292 366 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 ADH1BP00325 375 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 GATMP50440 423 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 MXD1Q05195 221 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 TRMT10BQ6PF06 316 aaKnown RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 RNF19BQ6ZMZ0 732 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 PIK3R3Q92569 461 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 IRF7Q92985 503 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 ZSWIM3Q96MP5 696 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 EFCAB11Q9BUY7 163 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 SSU72Q9NP77 194 aaKnown RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 FAM172BPA6NC97 362 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 COQ9O75208 318 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 ECI2O75521 394 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 CD2P06729 351 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 HSD11B1P28845 292 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 SLC6A9P48067 706 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 ARRB1P49407 418 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 TXNL4AP83876 142 aaKnown RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 DPY19L1Q2PZI1 675 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 SPIN4Q56A73 249 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 ANO7Q6IWH7 933 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 LRRC70Q7Z2Q7 622 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 FAM13CQ8NE31 585 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 HTRA1Q92743 480 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 UFD1Q92890 307 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 BORCS5Q969J3 196 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 TBX5Q99593 518 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 KXD1Q9BQD3 176 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 SLC2A4RGQ9NR83 387 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 SDHAF3Q9NRP4 125 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 TMLHEQ9NVH6 421 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 LGALS13Q9UHV8 139 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 MGAT4AQ9UM21 535 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 PLAGL1Q9UM63 463 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 PCDHGA3Q9Y5H0 932 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 KMOO15229 486 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 CDKN1CP49918 316 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 GALK1P51570 392 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 CHAF1BQ13112 559 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 KLF1Q13351 362 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 COL9A3Q14050 684 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 PITRM1Q5JRX3 1037 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 PLET1Q6UQ28 207 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 OR5AK3PQ8NH89 298 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 SLC32A1Q9H598 525 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 FANCFQ9NPI8 374 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 B3GAT2Q9NPZ5 323 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 THUMPD1Q9NXG2 353 aaKnown RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 SPATA7Q9P0W8 599 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 KCNK6Q9Y257 313 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 PCDHGB7Q9Y5F8 929 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 PARP4Q9UKK3 1724 aaKnown RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 DAPL1A0PJW8 107 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 PDCD5O14737 125 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 NOBOXO60393 691 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF30P17039 623 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 ADNP2Q6IQ32 1131 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 DRICH1Q6PGQ1 229 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 QSOX2Q6ZRP7 698 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 THOC6Q86W42 341 aaKnown RBP10.15□□□□□ -0.78
COL4A6-203ENST00000394872 DNAJB8Q8NHS0 232 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 SLC17A6Q9P2U8 582 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 STOML2Q9UJZ1 356 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 UTS2RQ9UKP6 389 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 UBR1Q8IWV7 1749 aa10.15□□□□□ -0.78
COL4A6-203ENST00000394872 KDELR3O43731 214 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 CHP2O43745 196 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 AGR2O95994 175 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 CBSLP0DN79 551 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 CBSP35520 551 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 DSTNP60981 165 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 LRRC66Q68CR7 880 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 CDKN2AIPNLQ96HQ2 116 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 MINDY3Q9H8M7 445 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 USP29Q9HBJ7 922 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 SLC22A14Q9Y267 594 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 CFL2Q9Y281 166 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 VSTM5A8MXK1 200 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 B4GALT2O60909 372 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 HLA-EP13747 358 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 CCNHP51946 323 aaPredicted RBP10.15□□□□□ -0.79
COL4A6-203ENST00000394872 E2F2Q14209 437 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 PROKR2Q8NFJ6 384 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 SMOC2Q9H3U7 446 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 CRTAC1Q9NQ79 661 aa10.15□□□□□ -0.79
COL4A6-203ENST00000394872 UPB1Q9UBR1 384 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms