RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 ATG9BQ674R7 924 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 PDE12Q6L8Q7 609 aaKnown RBP18.08■□□□□ 0.48
SIL1-202ENST00000394817 C12orf40Q86WS4 652 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 ZNF366Q8N895 744 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 VN1R2Q8NFZ6 395 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 HM13Q8TCT9 377 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 ATL1Q8WXF7 558 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 SMG7Q92540 1137 aaKnown RBP18.08■□□□□ 0.48
SIL1-202ENST00000394817 AP2M1Q96CW1 435 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 DGCR14Q96DF8 476 aaKnown RBP18.08■□□□□ 0.48
SIL1-202ENST00000394817 APIPQ96GX9 242 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 CPPED1Q9BRF8 314 aaPredicted RBP18.08■□□□□ 0.48
SIL1-202ENST00000394817 KAT8Q9H7Z6 458 aaKnown RBP18.08■□□□□ 0.48
SIL1-202ENST00000394817 CD320Q9NPF0 282 aa18.08■□□□□ 0.48
SIL1-202ENST00000394817 SMPD3Q9NY59 655 aaPredicted RBP18.08■□□□□ 0.48
SIL1-202ENST00000394817 REV3LO60673 3130 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 SLC5A10A0PJK1 596 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 ELOVL7A1L3X0 281 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 CLOCKO15516 846 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 DEAF1O75398 565 aaPredicted RBP18.07■□□□□ 0.48
SIL1-202ENST00000394817 ADH1CP00326 375 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 GNAO1P09471 354 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 TACR1P25103 407 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 MAPK9P45984 424 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 RPS9P46781 194 aaKnown RBP18.07■□□□□ 0.48
SIL1-202ENST00000394817 HNRNPFP52597 415 aaKnown RBP18.07■□□□□ 0.48
SIL1-202ENST00000394817 ST8SIA6P61647 398 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 GRIN2CQ14957 1233 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 GTDC1Q4AE62 458 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 MSANTD1Q6ZTZ1 278 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 CSGALNACT1Q8TDX6 532 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 FIG4Q92562 907 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 ITCHQ96J02 903 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 VPS50Q96JG6 964 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 TSSK3Q96PN8 268 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 PBX4Q9BYU1 374 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 NKX2-4Q9H2Z4 354 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 RMND5AQ9H871 391 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 SLC6A13Q9NSD5 602 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 PPT2Q9UMR5 302 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 PCDHB14Q9Y5E9 798 aa18.07■□□□□ 0.48
SIL1-202ENST00000394817 C5orf42Q9H799 3197 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 EPOPA6NHQ4 379 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 FAM220BPB1ANY3 271 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 H0Y858 1186 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 WNT9AO14904 365 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 GSTA4O15217 222 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 CATP04040 527 aaKnown RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 ZNF23P17027 643 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 CD22P20273 847 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 ROR2Q01974 943 aaKnown RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 IRF8Q02556 426 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 CHRNB3Q05901 458 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 TMEM115Q12893 351 aaPredicted RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 ACOX1Q15067 660 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 KCTD21Q4G0X4 260 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 BORAQ6PGQ7 559 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 THOC6Q86W42 341 aaKnown RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 CALHM3Q86XJ0 350 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 CCDC138Q96M89 665 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 CCM2Q9BSQ5 444 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 UGT2B28Q9BY64 529 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 CAAP1Q9H8G2 361 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 CLK4Q9HAZ1 481 aaKnown RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 NTN4Q9HB63 628 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 STOX2Q9P2F5 926 aaPredicted RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 FAM8A1Q9UBU6 413 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 INVSQ9Y283 1065 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 ITM2BQ9Y287 266 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 UPK1AO00322 258 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 VILLO15195 856 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 SPINT1O43278 529 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 SCELO95171 688 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 NELFEP18615 380 aaKnown RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 PTPN6P29350 595 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 TUBA4AP68366 448 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 PCDH1Q08174 1060 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 ABRQ12979 859 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 THEMIS2Q5TEJ8 643 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 RBM44Q6ZP01 1051 aaKnown RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 ETFBKMTQ8IXQ9 262 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 MICU2Q8IYU8 434 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 SLC22A15Q8IZD6 547 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 TMEM132CQ8N3T6 1108 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 SPDYE1Q8NFV5 336 aaPredicted RBP18.06■□□□□ 0.48
SIL1-202ENST00000394817 WDR20Q8TBZ3 569 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 RSPRY1Q96DX4 576 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 DTD2Q96FN9 168 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 APOLD1Q96LR9 279 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 COQ10AQ96MF6 247 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 TRIM4Q9C037 500 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 DPP7Q9UHL4 492 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 DMTF1Q9Y222 760 aa18.06■□□□□ 0.48
SIL1-202ENST00000394817 PCM1Q15154 2024 aa18.05■□□□□ 0.48
SIL1-202ENST00000394817 KPNA3O00505 521 aaPredicted RBP18.05■□□□□ 0.48
SIL1-202ENST00000394817 PRNPP04156 253 aa18.05■□□□□ 0.48
SIL1-202ENST00000394817 RETP07949 1114 aa18.05■□□□□ 0.48
SIL1-202ENST00000394817 CAPGP40121 348 aa18.05■□□□□ 0.48
SIL1-202ENST00000394817 PREPP48147 710 aa18.05■□□□□ 0.48
SIL1-202ENST00000394817 DPY19L1Q2PZI1 675 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms