RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TRIM46Q7Z4K8 759 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 VTCN1Q7Z7D3 282 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 GTF2IRD2Q86UP8 949 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 CYP4Z1Q86W10 505 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 ELMOD1Q8N336 334 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 SELENOMQ8WWX9 145 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 CCDC115Q96NT0 180 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 PRDM8Q9NQV8 689 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 C1orf109Q9NX04 203 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 WARS2Q9UGM6 360 aaKnown RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 NOTCH4Q99466 2003 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 TRBV5-4A0A0C4DH59 114 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 hCG_2039718K7EN88 272 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 YY2O15391 372 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 FTH1P02794 183 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 SDC1P18827 310 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 MAP2K4P45985 399 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 AP1S1P61966 158 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 LSM3P62310 102 aaKnown RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 CREMQ03060 361 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 RAPSNQ13702 412 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 BOP1Q14137 746 aaKnown RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 SMN1Q16637 294 aaKnown RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 CACHD1Q5VU97 1274 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 BROXQ5VW32 411 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 DOK6Q6PKX4 331 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 CCDC149Q6ZUS6 474 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 OR7A2PQ8NGA2 310 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 USP7Q93009 1102 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 FAM120BQ96EK7 910 aaKnown RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 ARMC7Q9H6L4 198 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 DCAF13Q9NV06 445 aaKnown RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 WBP1LQ9NX94 342 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 SLC28A1O00337 649 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 PER2O15055 1255 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 ABCB7O75027 752 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 RPS3P23396 243 aaKnown RBP eCLIP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 CASP9P55211 416 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 RPS14P62263 151 aaKnown RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 FPGSQ05932 587 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 ATP1A4Q13733 1029 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 Q6ZNX1 250 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 PLPP6Q8IY26 295 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 ALOXE3Q9BYJ1 711 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 PARVBQ9HBI1 364 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 SLC22A14Q9Y267 594 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 LOC100130705A0A1B0GUX0 176 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 WDR47O94967 919 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 HNRNPCP07910 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 CCNA2P20248 432 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 HLA-FP30511 346 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 GP2P55259 537 aaKnown RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 ISL1P61371 349 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 PTSQ03393 145 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 GTF2H3Q13889 308 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 PTCHD3Q3KNS1 767 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 SLC16A12Q6ZSM3 486 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 TMEM25Q86YD3 366 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 DCP2Q8IU60 420 aaKnown RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 CPXM2Q8N436 756 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 PLEKHA8Q96JA3 519 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 P2RY13Q9BPV8 354 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 NTMT1Q9BV86 223 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 FUNDC2Q9BWH2 189 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 KIAA1522Q9P206 1035 aaPredicted RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 MAFFQ9ULX9 164 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 TRIM64BA6NI03 449 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 ZNF701M0R085 212 aaPredicted RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 CLDN9O95484 217 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 EBLN1P0CF75 366 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 S100A3P33764 101 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 TGFBR1P36897 503 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 SPAM1P38567 509 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 DDX39BQ13838 428 aaKnown RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 TEAD2Q15562 447 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 MACC1Q6ZN28 852 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 UBE2R2Q712K3 238 aaPredicted RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 CALHM3Q86XJ0 350 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 CLECL1Q8IZS7 167 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 LILRA3Q8N6C8 439 aaPredicted RBP13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 FIBINQ8TAL6 211 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 SCAMP4Q969E2 229 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 FKBP10Q96AY3 582 aa13.11□□□□□ -0.31
GTF2F1-201ENST00000394456 DYTNA2CJ06 578 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 TMEM202A6NGA9 273 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 IL6P05231 212 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 GSSP48637 474 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 HTRA4P83105 476 aaPredicted RBP13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 ASTLQ6HA08 431 aaPredicted RBP13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 FBXO46Q6PJ61 603 aaPredicted RBP13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 PJA1Q8NG27 643 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 BADQ92934 168 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 RIBC2Q9H4K1 309 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 C8orf4Q9NR00 106 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms