RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 LRRC70Q7Z2Q7 622 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 OR2T29Q8NH02 315 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 CMTM7Q96FZ5 175 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 NEURL2Q9BR09 285 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 RIBC2Q9H4K1 309 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 ELOVL6Q9H5J4 265 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 TM9SF3Q9HD45 589 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 IL1RAPQ9NPH3 570 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 AFF4Q9UHB7 1163 aaKnown RBP18.34■□□□□ 0.53
CBX1-202ENST00000393408 SNX6Q9UNH7 406 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 PCDHGA10Q9Y5H3 936 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 HSPE1-MOB4S4R3N1 261 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 TBKBP1A7MCY6 615 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 RFXANKO14593 260 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 MAN1A2O60476 641 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 LATS1O95835 1130 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 CDH3P22223 829 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 SLC35A2P78381 396 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 KEAP1Q14145 624 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 SIM2Q14190 667 aaPredicted RBP18.33■□□□□ 0.53
CBX1-202ENST00000393408 CYP2A13Q16696 494 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 KDM4DQ6B0I6 523 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 SERPINA11Q86U17 422 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 TSPAN33Q86UF1 283 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 SLCO6A1Q86UG4 719 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 ZSWIM9Q86XI8 627 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 ELMOD1Q8N336 334 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 GPR26Q8NDV2 337 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 RORBQ92753 470 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 VMP1Q96GC9 406 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 ARMC7Q9H6L4 198 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 HMG20AQ9NP66 347 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 THG1LQ9NWX6 298 aaKnown RBP18.33■□□□□ 0.53
CBX1-202ENST00000393408 ERVW-1Q9UQF0 538 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 BACE2Q9Y5Z0 518 aa18.33■□□□□ 0.53
CBX1-202ENST00000393408 SLC22A1O15245 554 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 SOCS5O75159 536 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 LRATO95237 230 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 CYP4B1P13584 511 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 SELPP16109 830 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 NSG1P42857 185 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 MAP2K4P45985 399 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 GTF2H3Q13889 308 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 BOP1Q14137 746 aaKnown RBP18.33■□□□□ 0.52
CBX1-202ENST00000393408 GBX1Q14549 363 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 NPTX1Q15818 432 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 RETSATQ6NUM9 610 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 LINC00299Q6ZSB3 139 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 MSANTD1Q6ZTZ1 278 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 OR7A2PQ8NGA2 310 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 BHMTQ93088 406 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 YIPF6Q96EC8 236 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 APIPQ96GX9 242 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 EGLN2Q96KS0 407 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 MRPL9Q9BYD2 267 aaKnown RBP18.33■□□□□ 0.52
CBX1-202ENST00000393408 WDR12Q9GZL7 423 aaKnown RBP18.33■□□□□ 0.52
CBX1-202ENST00000393408 KLHL42Q9P2K6 505 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 AASSQ9UDR5 926 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 TPRKBQ9Y3C4 175 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 CPQQ9Y646 472 aa18.33■□□□□ 0.52
CBX1-202ENST00000393408 GREM1O60565 184 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 EFEMP2O95967 443 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 C1QCP02747 245 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 MAPK1P28482 360 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 CXCR4P61073 352 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 SREBF2Q12772 1141 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 ADPRMQ3LIE5 342 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 OR4F3Q6IEY1 312 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 CRIPAKQ8N1N5 446 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 TRMT2BQ96GJ1 504 aaKnown RBP18.32■□□□□ 0.52
CBX1-202ENST00000393408 ZNF641Q96N77 438 aaPredicted RBP18.32■□□□□ 0.52
CBX1-202ENST00000393408 ALPK1Q96QP1 1244 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 C2orf49Q9BVC5 232 aaPredicted RBP18.32■□□□□ 0.52
CBX1-202ENST00000393408 AASDHPPTQ9NRN7 309 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 TMED5Q9Y3A6 229 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 NPIPB8E9PQR5 432 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 KPNA4O00629 521 aaPredicted RBP18.32■□□□□ 0.52
CBX1-202ENST00000393408 SEMG1P04279 462 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 TPP2P29144 1249 aaPredicted RBP18.32■□□□□ 0.52
CBX1-202ENST00000393408 CCR7P32248 378 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 CSNK1DP48730 415 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 TAF12Q16514 161 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 TCTN1Q2MV58 587 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 SLC22A15Q8IZD6 547 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 PGBD3Q8N328 593 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 ADAMTS19Q8TE59 1207 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 NELL1Q92832 810 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 SLC22A12Q96S37 553 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 CLSTN3Q9BQT9 956 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 VN1R3Q9BXE9 311 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 MROQ9BYG7 248 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 NECTIN3Q9NQS3 549 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 ZDHHC3Q9NYG2 299 aa18.32■□□□□ 0.52
CBX1-202ENST00000393408 NPIPB15A6NHN6 443 aaPredicted RBP18.31■□□□□ 0.52
CBX1-202ENST00000393408 MAPK8P45983 427 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 MASP1P48740 699 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 B4GALNT1Q00973 533 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 OXA1LQ15070 435 aa18.31■□□□□ 0.52
CBX1-202ENST00000393408 TRIM16LQ309B1 348 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms