RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 C22orf39Q6P5X5 142 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 TMEM126BQ8IUX1 230 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 CFAP206Q8IYR0 622 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 DEPDC4Q8N2C3 294 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 WFDC5Q8TCV5 224 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 UBASH3BQ8TF42 649 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 RIOK2Q9BVS4 552 aaKnown RBP10.27□□□□□ -0.76
CALD1-203ENST00000393118 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.27□□□□□ -0.76
CALD1-203ENST00000393118 ASB1Q9Y576 335 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 GMPPBQ9Y5P6 360 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 CEPT1Q9Y6K0 416 aa10.27□□□□□ -0.76
CALD1-203ENST00000393118 TBC1D3BA6NDS4 549 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 FAM47E-STBD1D6RA91 191 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 LEFTY2O00292 366 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 TFECO14948 347 aaPredicted RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 AXIN1O15169 862 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 PTGS2P35354 604 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 PREPP48147 710 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 FOXM1Q08050 763 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 DGUOKQ16854 277 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 ZFP69Q49AA0 526 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 THAP5Q7Z6K1 395 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 SNX29P2Q8IUI4 249 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 SLC22A15Q8IZD6 547 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 MTG2Q9H4K7 406 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 EXOSC4Q9NPD3 245 aaKnown RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 IKZF3Q9UKT9 509 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 VPS4AQ9UN37 437 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 PCDHGB5Q9Y5G0 923 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 BACE2Q9Y5Z0 518 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 KRT87PA6NCN2 255 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 NPIPB15A6NHN6 443 aaPredicted RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 H3BM21 787 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 KPNA5O15131 536 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 TNFRSF21O75509 655 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 BMP10O95393 424 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 PRLP01236 227 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 CDH1P12830 882 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 CSF2RAP15509 400 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 CYP4F2P78329 520 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 DAG1Q14118 895 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 IHHQ14623 411 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 TMEM220Q6QAJ8 160 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 SERPINA13PQ6UXR4 307 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 YAF2Q8IY57 180 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 OVCA2Q8WZ82 227 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 TMEM125Q96AQ2 219 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 BIRC8Q96P09 236 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 RERGLQ9H628 205 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 CACYBPQ9HB71 228 aaKnown RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 RAPGEFL1Q9UHV5 662 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 NEU3Q9UQ49 428 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 ERVK-11Q9UQG0 969 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 LCTP09848 1927 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 PTPRFP10586 1907 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 A0A1W2PQ72 361 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 H0Y858 1186 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 TULP3O75386 442 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 GBAP04062 536 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 C8BP07358 591 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 ANXA4P09525 319 aaPredicted RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 IL7RP16871 459 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 ACRV1P26436 265 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 GPC1P35052 558 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 SF3B4Q15427 424 aaKnown RBP eCLIP10.27□□□□□ -0.77
CALD1-203ENST00000393118 MOGQ16653 247 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 PPP4R4Q6NUP7 873 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 HACD2Q6Y1H2 254 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 PAGE2Q7Z2X7 111 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 SLC22A16Q86VW1 577 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 TMEM102Q8N9M5 508 aaPredicted RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 OR2T11Q8NH01 316 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 ATL1Q8WXF7 558 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 KLF16Q9BXK1 252 aaPredicted RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 WDR12Q9GZL7 423 aaKnown RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 ADPRHL2Q9NX46 363 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 COQ3Q9NZJ6 369 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 ASF1AQ9Y294 204 aa10.27□□□□□ -0.77
CALD1-203ENST00000393118 MAGED1Q9Y5V3 778 aaPredicted RBP10.27□□□□□ -0.77
CALD1-203ENST00000393118 A0A1B0GTW7 788 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ADAM23O75077 832 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 EEDO75530 441 aaKnown RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 MATN4O95460 622 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 HSD17B1P14061 328 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 HPCAL1P37235 193 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 LY6G5CQ5SRR4 150 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 CPTPQ5TA50 214 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 UBE2UQ5VVX9 321 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 GDPD4Q6W3E5 623 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 GALNT10Q86SR1 603 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ZFAND4Q86XD8 727 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ZDHHC21Q8IVQ6 265 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ELMOD2Q8IZ81 293 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 OR52J3Q8NH60 311 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 FAM110BQ8TC76 370 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ITPKCQ96DU7 683 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 MUS81Q96NY9 551 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 RPF2Q9H7B2 306 aaKnown RBP10.26□□□□□ -0.77
CALD1-203ENST00000393118 ZNF696Q9H7X3 374 aa10.26□□□□□ -0.77
CALD1-203ENST00000393118 ITM2CQ9NQX7 267 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms