RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 GPR50Q13585 617 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 MFSD13AQ14CX5 517 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 OCLNQ16625 522 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 TSTQ16762 297 aaKnown RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 C3P1Q6ZMU1 363 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 ZSWIM9Q86XI8 627 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 LRRN4Q8WUT4 740 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 CREB3L1Q96BA8 519 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 SLCO4A1Q96BD0 722 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 TADA1Q96BN2 335 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 COQ8BQ96D53 544 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 RPL10LQ96L21 214 aaKnown RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 ASB2Q96Q27 587 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 AGO4Q9HCK5 861 aaKnown RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 SPHK1Q9NYA1 384 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 RBAKQ9NYW8 714 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 STOX2Q9P2F5 926 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 PGAP2Q9UHJ9 254 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 HCN2Q9UL51 889 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF541Q9H0D2 1346 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 USP54Q70EL1 1684 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 SNED1Q8TER0 1413 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 CDC7O00311 574 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 CASKO14936 926 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 GRAP2O75791 330 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 PGK1P00558 417 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 HLA-EP13747 358 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 ZP3P21754 424 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 ETV5P41161 510 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 GPR17Q13304 367 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 EXOSC2Q13868 293 aaKnown RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 RBBP7Q16576 425 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 SLFN12LQ6IEE8 588 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 SLC16A12Q6ZSM3 486 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 EPHX4Q8IUS5 362 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 Q8N402 240 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 CHST13Q8NET6 341 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 GPRASP2Q96D09 838 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 C1GALT1C1Q96EU7 318 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 TSPAN17Q96FV3 270 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 FAM167AQ96KS9 214 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 BARD1Q99728 777 aaKnown RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF251Q9BRH9 671 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 DNTTIP1Q9H147 329 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 LRRC4Q9HBW1 653 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 PDP1Q9P0J1 537 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 STAP1Q9ULZ2 295 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 INVSQ9Y283 1065 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 PCDHGB1Q9Y5G3 927 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 MAGED1Q9Y5V3 778 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 A0A0G2JMP0 313 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 CBX4O00257 560 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ULK1O75385 1050 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 IL18RAPO95256 599 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 CELF2O95319 508 aaKnown RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 MYL3P08590 195 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 DARSP14868 501 aaKnown RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 HLA-DMAP28067 261 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 TGFBR1P36897 503 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 GMPRP36959 345 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 TGFBR2P37173 567 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 MGAT3Q09327 533 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 POU4F2Q12837 409 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 CLLU1Q5K131 121 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 FSTL4Q6MZW2 842 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 FAM198BQ6UWH4 519 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 JAZF1Q86VZ6 243 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 PHF13Q86YI8 300 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ZZZ3Q8IYH5 903 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 C7orf31Q8N865 590 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 OR2T35Q8NGX2 323 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF675Q8TD23 568 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 CA5BP1Q8WTZ4 195 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 UHRF1Q96T88 793 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ACTR6Q9GZN1 396 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 TGIF2Q9GZN2 237 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 OR51E2Q9H255 320 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ACOT13Q9NPJ3 140 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 PLEKHA6Q9Y2H5 1048 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 LAMA4Q16363 1823 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ATRNL1Q5VV63 1379 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 NFASCO94856 1347 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 FPGTO14772 594 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ADAM12O43184 909 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 MMP20O60882 483 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 FGF18O76093 207 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ATG12O94817 140 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 METTL18O95568 372 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 OR56A5P0C7T3 313 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 LHCGRP22888 699 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ALDH9A1P49189 494 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 EEFSECP57772 596 aaKnown RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 TRAM2Q15035 370 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 CLEC6AQ6EIG7 209 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 DET1Q7L5Y6 550 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 FBXO16Q8IX29 292 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 CFAP206Q8IYR0 622 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 SYNPOQ8N3V7 929 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 PAPD5Q8NDF8 572 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms