RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CLPXO76031 633 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 SLC2A2P11168 524 aaPredicted RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 CSKP41240 450 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 DSTNP60981 165 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 SP2Q02086 613 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 RBBP4Q09028 425 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 KIAA1161Q6NSJ0 714 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 CAND1Q86VP6 1230 aaKnown RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 FBXL20Q96IG2 436 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 PRICKLE1Q96MT3 831 aaPredicted RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 PEBP4Q96S96 227 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 COMMD4Q9H0A8 199 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 OR2AG1Q9H205 316 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ADAP2Q9NPF8 381 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ABCB8Q9NUT2 735 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 TLR4O00206 839 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 TGFB1P01137 390 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ALPPP05187 535 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 CPN2P22792 545 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 GRK6P43250 576 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ADAM8P78325 824 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 TXNL4AP83876 142 aaKnown RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 INCA1Q0VD86 236 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 WSCD2Q2TBF2 565 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 MINDY4Q4G0A6 757 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 SPANXN4Q5MJ08 99 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ZNF773Q6PK81 442 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 LRRC70Q7Z2Q7 622 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 NUDT13Q86X67 352 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 PLD6Q8N2A8 252 aaKnown RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 CPA6Q8N4T0 437 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ZNF641Q96N77 438 aaPredicted RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 MGME1Q9BQP7 344 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 RBPJLQ9UBG7 517 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 AASSQ9UDR5 926 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 SLC22A14Q9Y267 594 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 DUXAA6NLW8 204 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SRPRAP08240 638 aaKnown RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 ALPIP09923 528 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 PITPNAQ00169 270 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 TUBA3EQ6PEY2 450 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 RPS27LQ71UM5 84 aaKnown RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 AMZ2Q86W34 360 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 DBF4BQ8NFT6 615 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 LMO3Q8TAP4 145 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 LRRC15Q8TF66 581 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 PKP4Q99569 1192 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SMURF2Q9HAU4 748 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 GKN1Q9NS71 199 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 MOCS1Q9NZB8 636 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 UPB1Q9UBR1 384 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 HS3ST4Q9Y661 456 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SNED1Q8TER0 1413 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 TRBC2A0A5B9 178 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 ABCB7O75027 752 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 TRIM3O75382 744 aaPredicted RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 PRKCGP05129 697 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 H1F0P07305 194 aaKnown RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 ACSL1P33121 698 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 ACVRL1P37023 503 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 CSTF1Q05048 431 aaKnown RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 ARHGAP1Q07960 439 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 TUBA3CQ13748 450 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 MEP1AQ16819 746 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 FAM129CQ86XR2 697 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 KLHL36Q8N4N3 616 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 AURKBQ96GD4 344 aaPredicted RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 PYURFQ96I23 114 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 CNDP2Q96KP4 475 aaKnown RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 ERMAPQ96PL5 475 aaPredicted RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 DERL2Q9GZP9 239 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 TOR3AQ9H497 397 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SLIT2O94813 1529 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 A0A075B6Q4 140 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 A0A0G2JN53 185 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 LRRC72A6NJI9 287 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 ANKRD66B4E2M5 251 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 LOC730098B7Z3J9 87 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SEPT4O43236 478 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 AKAP8O43823 692 aaKnown RBP12.81□□□□□ -0.36
LCA5-202ENST00000392959 FUT4P22083 530 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 IGFBP4P22692 258 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 AVPR1BP47901 424 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 DGKGP49619 791 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 STC1P52823 247 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 TSPAN5P62079 268 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 CHRNA6Q15825 494 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 DUOXA1Q1HG43 343 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 ZNF404Q494X3 552 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 EIPR1Q53HC9 387 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SNAP47Q5SQN1 464 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 LINGO2Q7L985 606 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 IQCHQ86VS3 1027 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 CILP2Q8IUL8 1156 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 SLITRK4Q8IW52 837 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 CLDN19Q8N6F1 224 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
LCA5-202ENST00000392959 TMEM203Q969S6 136 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms