RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 PCBP2Q15366 365 aaKnown RBP eCLIP17.54■□□□□ 0.43e-6■■■□□ 17.9
ERCC2-201ENST00000391941 ZXDCQ2QGD7 858 aaPredicted RBP17.54■□□□□ 0.4
ERCC2-201ENST00000391941 ZNF648Q5T619 568 aaPredicted RBP17.54■□□□□ 0.4
ERCC2-201ENST00000391941 SPRYD7Q5W111 196 aa17.54■□□□□ 0.4
ERCC2-201ENST00000391941 SERPINA9Q86WD7 417 aa17.54■□□□□ 0.4
ERCC2-201ENST00000391941 RHOXF1Q8NHV9 184 aa17.54■□□□□ 0.4
ERCC2-201ENST00000391941 APIPQ96GX9 242 aa17.54■□□□□ 0.4
ERCC2-201ENST00000391941 APOLD1Q96LR9 279 aa17.54■□□□□ 0.4
ERCC2-201ENST00000391941 PSKH2Q96QS6 385 aa17.54■□□□□ 0.4
ERCC2-201ENST00000391941 PSD2Q9BQI7 771 aa17.54■□□□□ 0.4
ERCC2-201ENST00000391941 TRMT13Q9NUP7 481 aaKnown RBP17.54■□□□□ 0.4
ERCC2-201ENST00000391941 RGS14O43566 566 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 NTRK1P04629 796 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 SLC19A1P41440 591 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 GZMMP51124 257 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 DOC2BQ14184 412 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 MAD2L1BPQ15013 274 aaPredicted RBP17.53■□□□□ 0.4
ERCC2-201ENST00000391941 FAM110CQ1W6H9 321 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 CTXN3Q4LDR2 81 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 LRRC73Q5JTD7 316 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 ALG1LQ6GMV1 187 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 PPP3R2Q96LZ3 170 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 KRT84Q9NSB2 600 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 BNIP3LO60238 219 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 PRAMEF1O95521 474 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 KLKB1P03952 638 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 ACPPP15309 386 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 TYMPP19971 482 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 S100A3P33764 101 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 MAPKAPK2P49137 400 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 USP39Q53GS9 565 aaKnown RBP17.53■□□□□ 0.4
ERCC2-201ENST00000391941 CACHD1Q5VU97 1274 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 OR2T5Q6IEZ7 315 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 OR2T29Q8NH02 315 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 TP63Q9H3D4 680 aaPredicted RBP17.53■□□□□ 0.4
ERCC2-201ENST00000391941 FBXO8Q9NRD0 319 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 SCN3BQ9NY72 215 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 NOX1Q9Y5S8 564 aa17.53■□□□□ 0.4
ERCC2-201ENST00000391941 A0A0U1RQF3 1178 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 MANBAO00462 879 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 AIREO43918 545 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 IDH2P48735 452 aaKnown RBP17.52■□□□□ 0.4
ERCC2-201ENST00000391941 DDX39BQ13838 428 aaKnown RBP17.52■□□□□ 0.4
ERCC2-201ENST00000391941 ACOX1Q15067 660 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 LRIT3Q3SXY7 679 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 UBE2UQ5VVX9 321 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 SHQ1Q6PI26 577 aaKnown RBP17.52■□□□□ 0.4
ERCC2-201ENST00000391941 ZNF621Q6ZSS3 439 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 HORMAD1Q86X24 394 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 FBLIM1Q8WUP2 373 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 CHCHD6Q9BRQ6 235 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 CENPOQ9BU64 300 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 NECTIN3Q9NQS3 549 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 RAD18Q9NS91 495 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 GPR83Q9NYM4 423 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 SNX6Q9UNH7 406 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 VPS9D1Q9Y2B5 631 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 TPRKBQ9Y3C4 175 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 PCDHGB1Q9Y5G3 927 aa17.52■□□□□ 0.4
ERCC2-201ENST00000391941 GBF1Q92538 1859 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 TRBV5-3A0A0A0MS03 114 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 M0R082 166 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 RFXANKO14593 260 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 ZNF623O75123 536 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 MZF1P28698 734 aaPredicted RBP17.52■□□□□ 0.39
ERCC2-201ENST00000391941 NRIP1P48552 1158 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 SYT6Q5T7P8 510 aaPredicted RBP17.52■□□□□ 0.39
ERCC2-201ENST00000391941 RNF219Q5W0B1 726 aaPredicted RBP17.52■□□□□ 0.39
ERCC2-201ENST00000391941 ADNP2Q6IQ32 1131 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 RFLNAQ6ZTI6 216 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 NANOGNBQ7Z5D8 188 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 GATAD2AQ86YP4 633 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 HIPK1Q86Z02 1210 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 CCDC103Q8IW40 242 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 ENTHD1Q8IYW4 607 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 TRPV1Q8NER1 839 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 ZNF566Q969W8 418 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 HSH2DQ96JZ2 352 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 RLIMQ9NVW2 624 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 PCDHB8Q9UN66 801 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 DHRS7Q9Y394 339 aa17.52■□□□□ 0.39
ERCC2-201ENST00000391941 PIKFYVEQ9Y2I7 2098 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 RAD51BO15315 384 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 YY2O15391 372 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 RETP07949 1114 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 RPL17P18621 184 aaKnown RBP17.51■□□□□ 0.39
ERCC2-201ENST00000391941 PTPN6P29350 595 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 SERPINB10P48595 397 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 COPZ1P61923 177 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 RPS14P62263 151 aaKnown RBP17.51■□□□□ 0.39
ERCC2-201ENST00000391941 MAP2K5Q13163 448 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 BCL2A1Q16548 175 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.51■□□□□ 0.39
ERCC2-201ENST00000391941 DEPDC1Q5TB30 811 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 AKAP14Q86UN6 197 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 ATL1Q8WXF7 558 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 KCNS3Q9BQ31 491 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 TTPALQ9BTX7 342 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 GPR62Q9BZJ7 368 aa17.51■□□□□ 0.39
ERCC2-201ENST00000391941 TPK1Q9H3S4 243 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms