RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 RAB43Q86YS6 212 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PLCZ1Q86YW0 608 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TMC8Q8IU68 726 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 RNF135Q8IUD6 432 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PLD3Q8IV08 490 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ADHFE1Q8IWW8 467 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 LAS2Q8IYD9 372 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ELMOD2Q8IZ81 293 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DEPDC4Q8N2C3 294 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 FBXO39Q8N4B4 442 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C9orf62Q8N4C0 152 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TEX26Q8N6G2 289 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PAF1Q8N7H5 531 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 BMPERQ8N8U9 685 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TTC29Q8NA56 475 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 B3GALNT2Q8NCR0 500 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 AGBL3Q8NEM8 1001 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CHST13Q8NET6 341 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 OR52B6Q8NGF0 335 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 OR52K2Q8NGK3 314 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 OR10T2Q8NGX3 314 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 OR2T29Q8NH02 315 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 OR10A6Q8NH74 314 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GRPEL2Q8TAA5 225 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 NETO1Q8TDF5 533 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SLC13A3Q8WWT9 602 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GGHQ92820 318 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 COPS5Q92905 334 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 FGF11Q92914 225 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SNAPC3Q92966 411 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 EXT2Q93063 718 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 FAM149B1Q96BN6 582 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 COQ8BQ96D53 544 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TMCO6Q96DC7 493 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PABPC5Q96DU9 382 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ZC3HAV1LQ96H79 300 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TMEM80Q96HE8 168 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PYURFQ96I23 114 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C7orf34Q96L11 122 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TBATAQ96M53 351 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DMRTB1Q96MA1 342 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GPR137Q96N19 417 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 OPALINQ96PE5 141 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DEPDC7Q96QD5 511 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TRIB3Q96RU7 358 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MYOCQ99972 504 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 RTP3Q9BQQ7 232 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TTYH2Q9BSA4 534 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 COLEC11Q9BWP8 271 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TTLL2Q9BWV7 592 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GTPBP2Q9BX10 602 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 NUAK2Q9H093 628 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C11orf54Q9H0W9 315 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 IRF2BPLQ9H1B7 796 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ATXN3LQ9H3M9 355 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PIF1Q9H611 641 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CLMPQ9H6B4 373 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 LIN7BQ9HAP6 207 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C3orf14Q9HBI5 128 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 HHATLQ9HCP6 504 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 FZD3Q9NPG1 666 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 NMRK2Q9NPI5 230 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SEMA4BQ9NPR2 832 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CNGB3Q9NQW8 809 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PRDM5Q9NQX1 630 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 RGS18Q9NS28 235 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TMEM39AQ9NV64 488 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TMEM184CQ9NVA4 438 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 WDR70Q9NW82 654 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C14orf119Q9NWQ9 140 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C1orf109Q9NX04 203 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MIOSQ9NXC5 875 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TAS2R16Q9NYV7 291 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 EHD3Q9NZN3 535 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GALPQ9UBC7 116 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 NUFIP1Q9UHK0 495 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ADGRE2Q9UHX3 823 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 EIF2B4Q9UI10 523 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 KLHL21Q9UJP4 597 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ELF5Q9UKW6 265 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MKLN1Q9UL63 735 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CDH9Q9ULB4 789 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SLC6A14Q9UN76 642 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PRELID1Q9Y255 219 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ITM2BQ9Y287 266 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 POLR3HQ9Y535 204 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PCDHGA2Q9Y5H1 932 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 KLK4Q9Y5K2 254 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TNPO3Q9Y5L0 923 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 LTBP3Q9NS15 1303 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DSPPQ9NZW4 1301 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MYOFQ9NZM1 2061 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 TCF20Q9UGU0 1960 aaKnown RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 KCNE1BA0A087WTH5 132 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SYNJ2BP-COX16A0A087WUM0 186 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 UBA6A0AVT1 1052 aaPredicted RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 NPEPPSL1A6NEC2 478 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 PRAMEF25A6NGN4 478 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CLCA1A8K7I4 914 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms