RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHOX-202ENST00000381575 TSTA3Q13630 321 aaPredicted RBP13.56□□□□□ -0.24
SHOX-202ENST00000381575 MYBPC3Q14896 1274 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
SHOX-202ENST00000381575 TTC23LQ6PF05 361 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 PRSS58Q8IYP2 241 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 PRELID2Q8N945 189 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 INPP5DQ92835 1189 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 RAD51AP1Q96B01 352 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 FER1L6-AS2Q96M78 137 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 IP6K3Q96PC2 410 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 SCN2AQ99250 2005 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 KIFC1Q9BW19 673 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 ZNF552Q9H707 407 aaPredicted RBP13.56□□□□□ -0.24
SHOX-202ENST00000381575 LRRC4CQ9HCJ2 640 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 CELSR2Q9HCU4 2923 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 SLC6A20Q9NP91 592 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 INTS7Q9NVH2 962 aaKnown RBP13.56□□□□□ -0.24
SHOX-202ENST00000381575 CDC23Q9UJX2 597 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 SOX13Q9UN79 622 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 CSAG2Q9Y5P2 127 aa13.56□□□□□ -0.24
SHOX-202ENST00000381575 LOC105369274A0A096LPK9 316 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 LOC102723532A0A0G2JNH3 316 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 A0A1W2PPV9 198 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 EIF2S1P05198 315 aaKnown RBP13.55□□□□□ -0.24
SHOX-202ENST00000381575 CCDC175P0C221 793 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 TPSB2P20231 275 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 ITGA3P26006 1051 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 ARSFP54793 590 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 GPS1Q13098 491 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 KCNJ11Q14654 390 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 TPSAB1Q15661 275 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 NKG7Q16617 165 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 ACSBG2Q5FVE4 666 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.55□□□□□ -0.24
SHOX-202ENST00000381575 WASHC2DQ5SRD0 308 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 FHL5Q5TD97 284 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 MRNIPQ6NTE8 343 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 TTC27Q6P3X3 843 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 CASC4Q6P4E1 433 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 LRRC8BQ6P9F7 803 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 SUSD1Q6UWL2 747 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 OVCH1Q7RTY7 1134 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 LRRC6Q86X45 466 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 OR4N4Q8N0Y3 316 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 CISD2Q8N5K1 135 aaKnown RBP13.55□□□□□ -0.24
SHOX-202ENST00000381575 TTC29Q8NA56 475 aaPredicted RBP13.55□□□□□ -0.24
SHOX-202ENST00000381575 OR2L3Q8NG85 312 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 SPSB2Q99619 263 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 SLC30A3Q99726 388 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 RAB11FIP5Q9BXF6 653 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 ASF1BQ9NVP2 202 aa13.55□□□□□ -0.24
SHOX-202ENST00000381575 A1L4Q6 167 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 ARHGEF33A8MVX0 844 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 GOLGA8MH3BSY2 632 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 AGPSO00116 658 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 SOCS6O14544 535 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 FFAR3O14843 346 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 GPR42O15529 346 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 GRM7Q14831 915 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 NR6A1Q15406 480 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 HIF1AQ16665 826 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 TYSND1Q2T9J0 566 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 ZC3H12BQ5HYM0 836 aaKnown RBP13.54□□□□□ -0.24
SHOX-202ENST00000381575 C4orf22Q6V702 233 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 SDCCAG8Q86SQ7 713 aaPredicted RBP13.54□□□□□ -0.24
SHOX-202ENST00000381575 OR2A1Q8NGT9 310 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 MAIP1Q8WWC4 291 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 FKBP10Q96AY3 582 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 SNRNP40Q96DI7 357 aaKnown RBP13.54□□□□□ -0.24
SHOX-202ENST00000381575 MS4A14Q96JA4 679 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 FOPNLQ96NB1 174 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 ZNF285Q96NJ3 590 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 ILKAPQ9H0C8 392 aaPredicted RBP13.54□□□□□ -0.24
SHOX-202ENST00000381575 SYNPO2LQ9H987 977 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
SHOX-202ENST00000381575 ATP13A2Q9NQ11 1180 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 ABCF3Q9NUQ8 709 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 ZC3H7BQ9UGR2 993 aaKnown RBP13.54□□□□□ -0.24
SHOX-202ENST00000381575 B3GNT3Q9Y2A9 372 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 ZKSCAN5Q9Y2L8 839 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 HS3ST3B1Q9Y662 390 aa13.54□□□□□ -0.24
SHOX-202ENST00000381575 KPNA5O15131 536 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 ALPPP05187 535 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 CHRM3P20309 590 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 MMP11P24347 488 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 CCZ1BP86790 482 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 CCZ1P86791 482 aaPredicted RBP13.53□□□□□ -0.24
SHOX-202ENST00000381575 CUL1Q13616 776 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 GBX1Q14549 363 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 KLHL38Q2WGJ6 581 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 TCTE1Q5JU00 501 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 KIAA0930Q6ICG6 404 aaPredicted RBP13.53□□□□□ -0.24
SHOX-202ENST00000381575 KIRREL2Q6UWL6 708 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 CENPUQ71F23 418 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 CAND1Q86VP6 1230 aaKnown RBP13.53□□□□□ -0.24
SHOX-202ENST00000381575 HPS6Q86YV9 775 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 IQCKQ8N0W5 287 aa13.53□□□□□ -0.24
SHOX-202ENST00000381575 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms