RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 P2RY13Q9BPV8 354 aa13.89□□□□□ -0.19
CLCN4-201ENST00000380829 POLR3HQ9Y535 204 aaPredicted RBP13.89□□□□□ -0.19
CLCN4-201ENST00000380829 TCF20Q9UGU0 1960 aaKnown RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 A0A1W2PP18 115 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 ZNF701M0R085 212 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 SPINT1O43278 529 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 TSPAN6O43657 245 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 KCNH1O95259 989 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 C8GP07360 202 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 HIST1H2AGP0C0S8 130 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 NAT1P18440 290 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 EPORP19235 508 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 HIST1H2ADP20671 130 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 DCKP27707 260 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 POLR2JP52435 117 aaKnown RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 PLA2G4EQ3MJ16 856 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 NHSL2Q5HYW2 709 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 PAGE3Q5JUK9 113 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 C6orf10Q5SRN2 563 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 LILRA3Q8N6C8 439 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 RASGEF1AQ8N9B8 481 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 ARRDC3Q96B67 414 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 SLCO4A1Q96BD0 722 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 LRRC58Q96CX6 371 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 MTFMTQ96DP5 389 aaKnown RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 HIST1H2AHQ96KK5 128 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 SAMD11Q96NU1 681 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 HIST1H2AJQ99878 128 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 FAM83CQ9BQN1 747 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 H2AFJQ9BTM1 129 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 POLR1BQ9H9Y6 1135 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 MRPL40Q9NQ50 206 aaKnown RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 HPS4Q9NQG7 708 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 ATAD3AQ9NVI7 634 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 EPOPA6NHQ4 379 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 CCDC154A6NI56 674 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 SAC3D1A6NKF1 404 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 EIF3FO00303 357 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 WNT9AO14904 365 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 PRNPP04156 253 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 GSSP48637 474 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 PCYT1AP49585 367 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 RPL38P63173 70 aaKnown RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 CAMK2BQ13554 666 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 CPSF6Q16630 551 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 HNRNPA1L2Q32P51 320 aaKnown RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 PLEKHS1Q5SXH7 462 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 TANGO2Q6ICL3 276 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 FOXJ1Q92949 421 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 GLYATL1Q969I3 302 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 PPWD1Q96BP3 646 aaKnown RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 NTMT1Q9BV86 223 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 TRIM54Q9BYV2 358 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 KLHL25Q9H0H3 589 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 EHD1Q9H4M9 534 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 SLC32A1Q9H598 525 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 ACTR8Q9H981 624 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 SLAMF8Q9P0V8 285 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 ZNF490Q9ULM2 529 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-201ENST00000380829 CCL27Q9Y4X3 112 aa13.88□□□□□ -0.19
CLCN4-201ENST00000380829 PABPN1LA6NDY0 278 aaKnown RBP13.87□□□□□ -0.19
CLCN4-201ENST00000380829 FAM47E-STBD1D6RA91 191 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 ULK1O75385 1050 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 TIPRLO75663 272 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 WDR47O94967 919 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 EBLN1P0CF75 366 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 SLC2A4P14672 509 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 ITPKAP23677 461 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 PBLDP30039 288 aaPredicted RBP13.87□□□□□ -0.19
CLCN4-201ENST00000380829 YAP1P46937 504 aaKnown RBP13.87□□□□□ -0.19
CLCN4-201ENST00000380829 PREPP48147 710 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 MRPL19P49406 292 aaKnown RBP13.87□□□□□ -0.19
CLCN4-201ENST00000380829 EMX2Q04743 252 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 NFATC3Q12968 1075 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 GRIK2Q13002 908 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 NFYCQ13952 458 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 ZNF234Q14588 700 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 PTCHD3Q3KNS1 767 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 CYP20A1Q6UW02 462 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 VASH1Q7L8A9 365 aaPredicted RBP13.87□□□□□ -0.19
CLCN4-201ENST00000380829 OFCC1Q8IZS5 231 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 Q8N9G6 341 aaPredicted RBP13.87□□□□□ -0.19
CLCN4-201ENST00000380829 DNAJB14Q8TBM8 379 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 CGREF1Q99674 301 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 HOPXQ9BPY8 73 aaPredicted RBP13.87□□□□□ -0.19
CLCN4-201ENST00000380829 PBX4Q9BYU1 374 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 ATG10Q9H0Y0 220 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 ACTL8Q9H568 366 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 TRPV5Q9NQA5 729 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 HEBP1Q9NRV9 189 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 RAD18Q9NS91 495 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 CMTM6Q9NX76 183 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 ZIM2Q9NZV7 527 aa13.87□□□□□ -0.19
CLCN4-201ENST00000380829 CNOT6Q9ULM6 557 aaKnown RBP13.87□□□□□ -0.19
CLCN4-201ENST00000380829 GFYI3L273 518 aa13.86□□□□□ -0.19
CLCN4-201ENST00000380829 RSL1D1O76021 490 aaKnown RBP13.86□□□□□ -0.19
CLCN4-201ENST00000380829 FTH1P02794 183 aa13.86□□□□□ -0.19
CLCN4-201ENST00000380829 ENO2P09104 434 aaPredicted RBP13.86□□□□□ -0.19
CLCN4-201ENST00000380829 MPC1LP0DKB6 136 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms