RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 FAM20CQ8IXL6 584 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 KLHDC8AQ8IYD2 350 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 PTGR2Q8N8N7 351 aaPredicted RBP18.15■□□□□ 0.5
SMN2-202ENST00000380742 OR2A1Q8NGT9 310 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 PHF21BQ96EK2 531 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 PPM1MQ96MI6 270 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 TGM7Q96PF1 710 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 OR4K3Q96R72 315 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 CCDC177Q9NQR7 707 aaPredicted RBP18.15■□□□□ 0.5
SMN2-202ENST00000380742 POMT2Q9UKY4 750 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 TMCO1Q9UM00 188 aa18.15■□□□□ 0.5
SMN2-202ENST00000380742 MN1Q10571 1320 aaPredicted RBP18.14■□□□□ 0.49
SMN2-202ENST00000380742 DCDC2BA2VCK2 349 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 LRRC14BA6NHZ5 514 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 HMGB1P1B2RPK0 211 aaPredicted RBP18.14■□□□□ 0.49
SMN2-202ENST00000380742 D6RAR5 112 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 MATN2O00339 956 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 SIX3O95343 332 aaPredicted RBP18.14■□□□□ 0.49
SMN2-202ENST00000380742 C9P02748 559 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 TAC1P20366 129 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 ATP5F1P24539 256 aaPredicted RBP18.14■□□□□ 0.49
SMN2-202ENST00000380742 MPSTP25325 297 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 ETV4P43268 484 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 LSSP48449 732 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 SPIDRQ14159 915 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 CAPN13Q6MZZ7 669 aaPredicted RBP18.14■□□□□ 0.49
SMN2-202ENST00000380742 TMEM71Q6P5X7 295 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 SPESP1Q6UW49 350 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 DHRS13Q6UX07 377 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 ZYG11AQ6WRX3 759 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 FAM92BQ6ZTR7 304 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 THOC6Q86W42 341 aaKnown RBP18.14■□□□□ 0.49
SMN2-202ENST00000380742 PLXDC1Q8IUK5 500 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 CCDC63Q8NA47 563 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 WDR48Q8TAF3 677 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 RDH11Q8TC12 318 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 UBTD2Q8WUN7 234 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 ACAT2Q9BWD1 397 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 CD244Q9BZW8 370 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 ZMYND15Q9H091 742 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 DLL3Q9NYJ7 618 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 TAC3Q9UHF0 121 aa18.14■□□□□ 0.49
SMN2-202ENST00000380742 TMEM120BA0PK00 339 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 STX16-NPEPL1H3BU86 382 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 STX16O14662 325 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 KIF1CO43896 1103 aaKnown RBP18.13■□□□□ 0.49
SMN2-202ENST00000380742 IPO13O94829 963 aaKnown RBP18.13■□□□□ 0.49
SMN2-202ENST00000380742 WDR47O94967 919 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 MYL2P10916 166 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 CPA3P15088 417 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 NPPBP16860 134 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 CLDN6P56747 220 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 NFKB2Q00653 900 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 CLPPQ16740 277 aaPredicted RBP18.13■□□□□ 0.49
SMN2-202ENST00000380742 THEMIS2Q5TEJ8 643 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 PRAMEF13Q5VWM6 474 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 TRIM73Q86UV7 250 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 SLC22A18Q96BI1 424 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 ZDHHC12Q96GR4 267 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 SEMA6CQ9H3T2 930 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 CNOT10Q9H9A5 744 aaKnown RBP18.13■□□□□ 0.49
SMN2-202ENST00000380742 PDP2Q9P2J9 529 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 COPG2Q9UBF2 871 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 KLHL3Q9UH77 587 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 SH2B3Q9UQQ2 575 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 APOBEC2Q9Y235 224 aaKnown RBP18.13■□□□□ 0.49
SMN2-202ENST00000380742 SLC22A14Q9Y267 594 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 PCDHB11Q9Y5F2 797 aa18.13■□□□□ 0.49
SMN2-202ENST00000380742 TM9SF1O15321 606 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 STK16O75716 305 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 ZWINTO95229 277 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 CCND1P24385 295 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 PCLAFQ15004 111 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 PCBP2Q15366 365 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMN2-202ENST00000380742 SF1Q15637 639 aaKnown RBP18.12■□□□□ 0.49
SMN2-202ENST00000380742 SLC5A12Q1EHB4 618 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 CDCP2Q5VXM1 449 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 KIAA1614Q5VZ46 1190 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 LCTLQ6UWM7 567 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 SLITRK4Q8IW52 837 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 OR2L3Q8NG85 312 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 OR4D9Q8NGE8 314 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 MAP3K3Q99759 626 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 MIPEPQ99797 713 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 DPYSL5Q9BPU6 564 aa18.12■□□□□ 0.49
SMN2-202ENST00000380742 DCHS1Q96JQ0 3298 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 IGHV5-10-1A0A0J9YXX1 117 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 CCNT2O60583 730 aaKnown RBP18.11■□□□□ 0.49
SMN2-202ENST00000380742 CDK4P11802 303 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 EEF1DP29692 281 aaKnown RBP18.11■□□□□ 0.49
SMN2-202ENST00000380742 HPDP32754 393 aaPredicted RBP18.11■□□□□ 0.49
SMN2-202ENST00000380742 PDX1P52945 283 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 SLC18A1P54219 525 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 PRKAA2P54646 552 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 PRDX1Q06830 199 aaKnown RBP18.11■□□□□ 0.49
SMN2-202ENST00000380742 SNAP47Q5SQN1 464 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 ICE2Q659A1 982 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 B3GNT8Q7Z7M8 397 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 SLC22A9Q8IVM8 553 aa18.11■□□□□ 0.49
SMN2-202ENST00000380742 C10orf107Q8IVU9 208 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms