RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 VSTM2BA6NLU5 285 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 IQCF5A8MTL0 148 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 NRP2O60462 931 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 USP1O94782 785 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 S1PR4O95977 384 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 ZGLP1P0C6A0 271 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 CARSP49589 748 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 PLOD1Q02809 727 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 FAM214AQ32MH5 1076 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 VWA2Q5GFL6 755 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 YOD1Q5VVQ6 348 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 ZNF324BQ6AW86 544 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 FRMPD2BQ6IN97 320 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 C11orf63Q6NUN7 778 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 RPUSD3Q6P087 351 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 DCUN1D3Q8IWE4 304 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 FAM71DQ8N9W8 422 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 MIPEPQ99797 713 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 LRRC40Q9H9A6 602 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 LUC7LQ9NQ29 371 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 ZNF282Q9UDV7 671 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 TSR3Q9UJK0 312 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 KLF2Q9Y5W3 355 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 FAM169AQ9Y6X4 670 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 CELSR1Q9NYQ6 3014 aa16.98■□□□□ 0.31
PDLIM4-202ENST00000379018 CCDC168Q8NDH2 2452 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 CSMD2Q7Z408 3487 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 CTSVO60911 334 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 METTL18O95568 372 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 ONECUT2O95948 504 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 RPN2P04844 631 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 PTMAP06454 111 aaKnown RBP16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 PRR35P0CG20 571 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 FBLP22087 321 aaKnown RBP16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 CCR7P32248 378 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 BDKRB1P46663 353 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 TNFSF10P50591 281 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 KCTD11Q693B1 232 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 BNC2Q6ZN30 1099 aaPredicted RBP16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 VSTM4Q8IW00 320 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 SLC22A15Q8IZD6 547 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 KRT222Q8N1A0 295 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 OR2L8Q8NGY9 312 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 SKA2Q8WVK7 121 aaPredicted RBP16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 TRIM56Q9BRZ2 755 aaKnown RBP16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 MENTQ9BUN1 341 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 SEC14L3Q9UDX4 400 aa16.97■□□□□ 0.31
PDLIM4-202ENST00000379018 LOC105369274A0A096LPK9 316 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 LOC102723532A0A0G2JNH3 316 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 WFS1O76024 890 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 GOT2P00505 430 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 ERVK-10P10266 1014 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 COX6A1P12074 109 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 CXCR2P25025 360 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 MST1P26927 711 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 SOX11P35716 441 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 HADHBP55084 474 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 NAP1L1P55209 391 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 COPS2P61201 443 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 PMP22Q01453 160 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 PARP6Q2NL67 630 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 NDUFAF7Q7L592 441 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 LAPTM4BQ86VI4 370 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 OR4N4Q8N0Y3 316 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 ZNF808Q8N4W9 903 aaPredicted RBP16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 AMER2Q8N7J2 671 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 HDAC10Q969S8 669 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 CABS1Q96KC9 395 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 IL1RAPL1Q9NZN1 696 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 SLC2A6Q9UGQ3 507 aa16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 RUVBL2Q9Y230 463 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-202ENST00000379018 F8W8V4 182 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 RASGRF2O14827 1237 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 RASAL1O95294 804 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 APOA4P06727 396 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 CTNNA1P35221 906 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 PTGER4P35408 488 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 EMP2P54851 167 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 GRB7Q14451 532 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 ZNF630Q2M218 657 aaPredicted RBP16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 LDB1Q86U70 411 aaPredicted RBP16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 DNAAF3Q8N9W5 541 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 OR52K1Q8NGK4 314 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 OR6P1Q8NGX9 317 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 PSMF1Q92530 271 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 TTC1Q99614 292 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 TSSK1BQ9BXA7 367 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 CHST11Q9NPF2 352 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 TRPC4Q9UBN4 977 aa16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 MRPS2Q9Y399 296 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-202ENST00000379018 AKAP9Q99996 3911 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 FITM1A5D6W6 292 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 MROH6A6NGR9 719 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 TJP3O95049 919 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 WDPCPO95876 746 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 TMED2Q15363 201 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 INAQ16352 499 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 CCSMST1Q4G0I0 132 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 ATG9BQ674R7 924 aa16.94■□□□□ 0.3
PDLIM4-202ENST00000379018 HIBCHQ6NVY1 386 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms