RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ARCN1P48444 511 aaKnown RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 ZNF140P52738 457 aaPredicted RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SH3BP2P78314 561 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 EPS8Q12929 822 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 GRB7Q14451 532 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SPANXN4Q5MJ08 99 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC2A7Q6PXP3 512 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 STX19Q8N4C7 294 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 TEX26Q8N6G2 289 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 KDM1BQ8NB78 822 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC7A6OSQ96CW6 309 aaPredicted RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC47A1Q96FL8 570 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 PLEKHG4BQ96PX9 1271 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 WDR83Q9BRX9 315 aaKnown RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 OR51B5Q9H339 312 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 C3orf14Q9HBI5 128 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 EMCNQ9ULC0 261 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 A0A087WXM4 84 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 GM2AP17900 193 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 PSMB9P28065 219 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 NUP107P57740 925 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 RPS7P62081 194 aaKnown RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 DPY19L1Q2PZI1 675 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 MANEALQ5VSG8 457 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 FAM46DQ8NEK8 389 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 OR9A1PQ8NGU1 263 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 CGREF1Q99674 301 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 MRPS30Q9NP92 439 aaKnown RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 GDE1Q9NZC3 331 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 LRRC42Q9Y546 428 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 DNAJC15Q9Y5T4 150 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 A0A1W2PQU0 124 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 H3BQ06 376 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 GPIP06744 558 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 PCSK2P16519 638 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 BUD31P41223 144 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 HSPB3Q12988 150 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 EOGTQ5NDL2 527 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 TMEM240Q5SV17 173 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 OR4F3Q6IEY1 312 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 TMIGD1Q6UXZ0 262 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 FAM47BQ8NA70 645 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 GPR150Q8NGU9 434 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 HSPBAP1Q96EW2 488 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 OSBPL11Q9BXB4 747 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 C1orf21Q9H246 121 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 INTS7Q9NVH2 962 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 WBP1LQ9NX94 342 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 SCHIP1Q9P0W5 487 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 LHX3Q9UBR4 397 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 SMIM31A0A1B0GVY4 71 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 WASH3PC4AMC7 463 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 I6L893 689 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 FAM20BO75063 409 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CNOT3O75175 753 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 SERPINI2O75830 405 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 DLGAP3O95886 979 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 ADH1BP00325 375 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 GBAP04062 536 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 MTHFD1P11586 935 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CCR4P51679 360 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CCR8P51685 355 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CASP9P55211 416 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 EMX2Q04743 252 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CYP4F3Q08477 520 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 ERICH5Q6P6B1 374 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CASP12Q6UXS9 341 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CBR4Q8N4T8 237 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 NACC2Q96BF6 587 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 NSMCE3Q96MG7 304 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 SPATA5L1Q9BVQ7 753 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 STON1Q9Y6Q2 735 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 SNTNA6NMZ2 147 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 MID1O15344 667 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 PGRP06401 933 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 HSD17B2P37059 387 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CXorf57Q6NSI4 855 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 NANOGNBQ7Z5D8 188 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 DCUN1D3Q8IWE4 304 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CD200R1Q8TD46 325 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 CANT1Q8WVQ1 401 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 UTP4Q969X6 686 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 ABHD8Q96I13 439 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 POLR1BQ9H9Y6 1135 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 MRPS33Q9Y291 106 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
SHROOM1-203ENST00000378679 PIPSLA2A3N6 862 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ERN1O75460 977 aaKnown RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ITGA2P17301 1181 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 BLKP51451 505 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 SP140Q13342 867 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 PTGR1Q14914 329 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ZNHIT3Q15649 155 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 CST6Q15828 149 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 RABL3Q5HYI8 236 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 BPIFB6Q8NFQ5 453 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ZNF607Q96SK3 696 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 MUC13Q9H3R2 512 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 KRCC1Q9NPI7 259 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms