RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 H3BQ06 376 aaPredicted RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 SHMT2P34897 504 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 CTSOP43234 321 aaPredicted RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 ST13P50502 369 aaKnown RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 COMMD2Q86X83 199 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 CEP97Q8IW35 865 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 NAT14Q8WUY8 206 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 FAM3CQ92520 227 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 MYDGFQ969H8 173 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 NSMCE3Q96MG7 304 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 DNMT3BQ9UBC3 853 aaKnown RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 SLC35E2BP0CK96 405 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 AGTR2P50052 363 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 PRRT3Q5FWE3 981 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 TOR1AIP1Q5JTV8 583 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 MACC1Q6ZN28 852 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.65■□□□□ 0.97e-8■■■■■ 87
SKI-201ENST00000378536 MAPK15Q8TD08 544 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 ENO4A6NNW6 628 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 CSNK2A2P19784 350 aaPredicted RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 CDKN2DP55273 166 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 FOLH1Q04609 750 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 TRPV3Q8NET8 790 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 PDP1Q9P0J1 537 aaPredicted RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 hCG_2014768A0A024R1R8 64 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 NCK1P16333 377 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 FDXRP22570 491 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 BTN3A2P78410 334 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 NAIF1Q69YI7 327 aaPredicted RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 ZNF730Q6ZMV8 503 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 CLVS1Q8IUQ0 354 aaPredicted RBP20.65■□□□□ 0.9
SKI-201ENST00000378536 KCNN1Q92952 543 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 DTNBP1Q96EV8 351 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 AP4B1Q9Y6B7 739 aa20.65■□□□□ 0.9
SKI-201ENST00000378536 FGF3P11487 239 aaPredicted RBP20.64■□□□□ 0.9
SKI-201ENST00000378536 PTSQ03393 145 aa20.64■□□□□ 0.9
SKI-201ENST00000378536 KCNA7Q96RP8 456 aa20.64■□□□□ 0.9
SKI-201ENST00000378536 PGDP52209 483 aa20.64■□□□□ 0.9
SKI-201ENST00000378536 TRNP1Q6NT89 227 aa20.64■□□□□ 0.9
SKI-201ENST00000378536 ZNF540Q8NDQ6 660 aa20.64■□□□□ 0.9
SKI-201ENST00000378536 ADAM30Q9UKF2 790 aa20.64■□□□□ 0.9
SKI-201ENST00000378536 CDH1P12830 882 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 TAF13Q15543 124 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 COX18Q8N8Q8 333 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 DGCR6LQ9BY27 220 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 LRRC3Q9BY71 257 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 SPATA6Q9NWH7 488 aaPredicted RBP20.64■□□□□ 0.89
SKI-201ENST00000378536 KLHL33A6NCF5 533 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 CYP4B1P13584 511 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 BROXQ5VW32 411 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 LPCAT4Q643R3 524 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 TMC8Q8IU68 726 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 MKS1Q9NXB0 559 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 TNFRSF11BO00300 401 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 KIAA0355O15063 1070 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 KDELC1Q6UW63 502 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 GJD3Q8N144 294 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 SLC39A13Q96H72 371 aa20.64■□□□□ 0.89
SKI-201ENST00000378536 DENND2DQ9H6A0 471 aaPredicted RBP20.64■□□□□ 0.89
SKI-201ENST00000378536 PSMD4P55036 377 aaKnown RBP20.63■□□□□ 0.89
SKI-201ENST00000378536 RPS13P62277 151 aaKnown RBP20.63■□□□□ 0.89
SKI-201ENST00000378536 FAM156AQ8NDB6 213 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 ISG20Q96AZ6 181 aaKnown RBP20.63■□□□□ 0.89
SKI-201ENST00000378536 ZNF382Q96SR6 550 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 PNPLA3Q9NST1 481 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 TAS2R1Q9NYW7 299 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 COL4A1P02462 1669 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 DRD1P21728 446 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 IGFALSP35858 605 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 WDR36Q8NI36 951 aaKnown RBP20.63■□□□□ 0.89
SKI-201ENST00000378536 OLFM1Q99784 485 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 SMAD6O43541 496 aaKnown RBP20.63■□□□□ 0.89
SKI-201ENST00000378536 CD247P20963 164 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 GSTM4Q03013 218 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 PRDM8Q9NQV8 689 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 ARCN1P48444 511 aaKnown RBP20.63■□□□□ 0.89
SKI-201ENST00000378536 ADAM17P78536 824 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 LHX8Q68G74 356 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 CIB1Q99828 191 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 SCML1Q9UN30 329 aa20.63■□□□□ 0.89
SKI-201ENST00000378536 ZCWPW2A0A1B0GU75 182 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 INAQ16352 499 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 SLC30A8Q8IWU4 369 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 RBM4BQ9BQ04 359 aaKnown RBP20.62■□□□□ 0.89
SKI-201ENST00000378536 RBM4Q9BWF3 364 aaKnown RBP20.62■□□□□ 0.89
SKI-201ENST00000378536 ZCCHC3Q9NUD5 404 aaKnown RBP20.62■□□□□ 0.89
SKI-201ENST00000378536 RIMKLBQ9ULI2 386 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 SPO11Q9Y5K1 396 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 MYH15Q9Y2K3 1946 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 MATN2O00339 956 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 PLK4O00444 970 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 OR6B1O95007 311 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 BCL10O95999 233 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 RIPK1Q13546 671 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 TNFAIP8L2Q6P589 184 aaPredicted RBP20.62■□□□□ 0.89
SKI-201ENST00000378536 TSPAN14Q8NG11 270 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 KLHL1Q9NR64 748 aa20.62■□□□□ 0.89
SKI-201ENST00000378536 IFT80Q9P2H3 777 aaPredicted RBP20.62■□□□□ 0.89
SKI-201ENST00000378536 UGT2B11O75310 529 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms