RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 DPY19L1Q2PZI1 675 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 PDZK1Q5T2W1 519 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 NANOGP8Q6NSW7 305 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 TMBIM1Q969X1 311 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 LINC00597Q9H2U6 94 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 NANOGQ9H9S0 305 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 DNAJB9Q9UBS3 223 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 ARID1BQ8NFD5 2236 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-203ENST00000378169 MYO10Q9HD67 2058 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 ENO2P09104 434 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 NT5EP21589 574 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 FDXRP22570 491 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 EMX2Q04743 252 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 GANABQ14697 944 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 MACC1Q6ZN28 852 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 LRRC70Q7Z2Q7 622 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 TTC29Q8NA56 475 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 OR4K1Q8NGD4 311 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 OR52L1Q8NGH7 329 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 NODALQ96S42 347 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF382Q96SR6 550 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RNF38Q9H0F5 515 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 EXD2Q9NVH0 621 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 FBXL12Q9NXK8 326 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 NDUFB5O43674 189 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RPL4P36578 427 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 HTR6P50406 440 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RAB33AQ14088 237 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 NR1D2Q14995 579 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RSBN1Q5VWQ0 802 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 ENPP7Q6UWV6 458 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 GPR65Q8IYL9 337 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 SRFBP1Q8NEF9 429 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 BIRC7Q96CA5 298 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 SLC38A2Q96QD8 506 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 TEFMQ96QE5 360 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 TRMT61BQ9BVS5 477 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 KCNK13Q9HB14 408 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 HCFC1R1Q9NWW0 138 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 CLDND1Q9NY35 253 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 EHD3Q9NZN3 535 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 FZD4Q9ULV1 537 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 PDE10AQ9Y233 779 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 COLEC10Q9Y6Z7 277 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 TTC34A8MYJ7 566 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 OR6B1O95007 311 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 BPIP17213 487 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RGS8P57771 180 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 EIF2B5Q13144 721 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 BIKQ13323 160 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 PCBP2Q15366 365 aaKnown RBP eCLIP12.86□□□□□ -0.351e-8■■■■■ 46
NPHP4-203ENST00000378169 KRTCAP2Q8N6L1 136 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 CHST14Q8NCH0 376 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 C19orf18Q8NEA5 215 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RANBP9Q96S59 729 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 SORT1Q99523 831 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RAD9AQ99638 391 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 ADAMTS6Q9UKP5 1117 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 PRR23D1E9PI22 279 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 GRID2O43424 1007 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 DFNA5O60443 496 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 PRR23D2P0DMB1 279 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 CMPK1P30085 196 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RPS13P62277 151 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 MADCAM1Q13477 382 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 DAG1Q14118 895 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 KCTD8Q6ZWB6 473 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 KCT2Q8NC54 265 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 FUBP1Q96AE4 644 aaKnown RBP12.86□□□□□ -0.35
NPHP4-203ENST00000378169 SIPA1Q96FS4 1042 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 POPDC3Q9HBV1 291 aa12.86□□□□□ -0.35
NPHP4-203ENST00000378169 RGS10O43665 173 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 UGT2B11O75310 529 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 SLC35G6P0C7Q6 338 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 GTF2E2P29084 291 aaKnown RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 TM4SF4P48230 202 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 LRRC32Q14392 662 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 RFTN2Q52LD8 501 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 LRRTM4Q86VH4 590 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 TMEM173Q86WV6 379 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 SMYD1Q8NB12 490 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 TEX47Q8TBZ9 253 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 BADQ92934 168 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 Q96MT0 163 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 MGME1Q9BQP7 344 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 SOX17Q9H6I2 414 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 MRPS7Q9Y2R9 242 aaKnown RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 ADAMDEC1O15204 470 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 RSL1D1O76021 490 aaKnown RBP12.85□□□□□ -0.35
NPHP4-203ENST00000378169 CDH3P22223 829 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 GALK1P51570 392 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 STX4Q12846 297 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 ABRAXAS2Q15018 415 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 PTPRRQ15256 657 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 NADK2Q4G0N4 442 aa12.85□□□□□ -0.35
NPHP4-203ENST00000378169 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms