RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CA5AP35218 305 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 CLK1P49759 484 aaKnown RBP16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 FCGRTP55899 365 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 HMGCS1Q01581 520 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 DEFB115Q30KQ5 88 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 PTRHD1Q6GMV3 140 aaKnown RBP16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 DESI1Q6ICB0 168 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 PRSS55Q6UWB4 352 aaPredicted RBP16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 TAS1R1Q7RTX1 841 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 ADAMTSL2Q86TH1 951 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 LILRB4Q8NHJ6 448 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 SLC13A3Q8WWT9 602 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 GTF2H4Q92759 462 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 CLSTN3Q9BQT9 956 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 BOCQ9BWV1 1114 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 GPR63Q9BZJ6 419 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 MMP27Q9H306 513 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 IL17CQ9P0M4 197 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 TAF4O00268 1085 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 SCAMP3O14828 347 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 SCELO95171 688 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 ALPIP09923 528 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 MZF1P28698 734 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 NKX3-2P78367 333 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 PON2Q15165 354 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 MAPKAPK3Q16644 382 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 SGO1Q5FBB7 561 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 LAIR1Q6GTX8 287 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 CLDN19Q8N6F1 224 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 FAM83FQ8NEG4 500 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 PROX1Q92786 737 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 PDLIM5Q96HC4 596 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 APOL5Q9BWW9 433 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 C6orf62Q9GZU0 229 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 EPS8L2Q9H6S3 715 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 MARCH5Q9NX47 278 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 OPTCQ9UBM4 332 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 CARD8Q9Y2G2 431 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 PABPN1LA6NDY0 278 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 AGAP5A6NIR3 686 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 COCHO43405 550 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 PARNO95453 639 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 TUFMP49411 452 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 CACNG1Q06432 222 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 SMN1Q16637 294 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 RSBN1Q5VWQ0 802 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 TUBA3EQ6PEY2 450 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 NCEH1Q6PIU2 408 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 TRAF7Q6Q0C0 670 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 FAM151BQ6UXP7 276 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 UTS2BQ765I0 119 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 GALNT13Q8IUC8 556 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 MICU2Q8IYU8 434 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 STK40Q8N2I9 435 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 WBP2Q969T9 261 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 PPP3R2Q96LZ3 170 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 EGFL8Q99944 293 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 CCNKO75909 580 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 ALDH1A1P00352 501 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 GTF2E2P29084 291 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 CXCR4P61073 352 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 SPANXN4Q5MJ08 99 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 FUT10Q6P4F1 479 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 CYP4Z1Q86W10 505 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 KRTCAP2Q8N6L1 136 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 LKAAEAR1Q8TD35 194 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 ATL1Q8WXF7 558 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 NACC2Q96BF6 587 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 ZBTB20Q9HC78 741 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 DCAF13Q9NV06 445 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 DKK3Q9UBP4 350 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 ANGPTL3Q9Y5C1 460 aa16.18■□□□□ 0.18
PCDHA1-201ENST00000378133 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 A0A1B0GVM2 712 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 ADAM12O43184 909 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 FAM20BO75063 409 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 STC2O76061 302 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 PTTG1O95997 202 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 KRT8P05787 483 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 BMP1P13497 986 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 AKT1P31749 480 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 SLC11A1P49279 550 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 MVKQ03426 396 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 PRKCZQ05513 592 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 FADDQ13158 208 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 GBX1Q14549 363 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 ATXN7L2Q5T6C5 722 aaPredicted RBP16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 CXorf57Q6NSI4 855 aaKnown RBP16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 CES5AQ6NT32 575 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 TMEM173Q86WV6 379 aaPredicted RBP16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 PHACTR4Q8IZ21 702 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 SLC22A15Q8IZD6 547 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 SIX5Q8N196 739 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 OR10Q1Q8NGQ4 319 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 ZBTB18Q99592 522 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 DPY30Q9C005 99 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 CLPBQ9H078 707 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 SLC25A37Q9NYZ2 338 aa16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 EIF3LQ9Y262 564 aaKnown RBP16.17■□□□□ 0.18
PCDHA1-201ENST00000378133 GMPPBQ9Y5P6 360 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms