RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 RASA2Q15283 850 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 TSNQ15631 228 aaKnown RBP12.76□□□□□ -0.37
CKAP2-202ENST00000378034 FAM83EQ2M2I3 478 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 AGTRAPQ6RW13 159 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 TIFABQ6ZNK6 161 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 FRA10AC1Q70Z53 315 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 TAX1BP1Q86VP1 789 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 MREGQ8N565 214 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 C19orf47Q8N9M1 422 aaKnown RBP12.76□□□□□ -0.37
CKAP2-202ENST00000378034 OR2L3Q8NG85 312 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 STAG3L4Q8TBR4 150 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 USP7Q93009 1102 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 CABS1Q96KC9 395 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 FCRL4Q96PJ5 515 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 FANCEQ9HB96 536 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 CCDC177Q9NQR7 707 aaPredicted RBP12.76□□□□□ -0.37
CKAP2-202ENST00000378034 IKZF3Q9UKT9 509 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 AKAP13Q12802 2813 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 PCM1Q15154 2024 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 C1QTNF9BB2RNN3 333 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 TRIM49D1C9J1S8 452 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 ANXA5P08758 320 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 C1QTNF9P0C862 333 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 FGF5P12034 268 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 COL6A2P12110 1019 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 PRDX1Q06830 199 aaKnown RBP12.76□□□□□ -0.37
CKAP2-202ENST00000378034 FOXM1Q08050 763 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 TRIM73Q86UV7 250 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 TDRPQ86YL5 185 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 TCAIMQ8N3R3 496 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 MDM1Q8TC05 714 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 OR6C1Q96RD1 312 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 IGSF5Q9NSI5 407 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 UTP6Q9NYH9 597 aaKnown RBP12.76□□□□□ -0.37
CKAP2-202ENST00000378034 ANKMY1Q9P2S6 941 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 C9orf172C9J069 976 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 AGRPO00253 132 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 KLHL2O95198 593 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 NUDT17P0C025 328 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 EBLN1P0CF75 366 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 PVRP15151 417 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 FOLR1P15328 257 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 HRH2P25021 359 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 SLC5A2P31639 672 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 SH3BP2P78314 561 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 TUBB3Q13509 450 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 ACAP2Q15057 778 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.75□□□□□ -0.37
CKAP2-202ENST00000378034 ICE2Q659A1 982 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 CAPN13Q6MZZ7 669 aaPredicted RBP12.75□□□□□ -0.37
CKAP2-202ENST00000378034 KLC3Q6P597 504 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 SUSD1Q6UWL2 747 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 GPSM1Q86YR5 675 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 CENPLQ8N0S6 344 aaPredicted RBP12.75□□□□□ -0.37
CKAP2-202ENST00000378034 SPATA6LQ8N4H0 392 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 KDF1Q8NAX2 398 aaPredicted RBP12.75□□□□□ -0.37
CKAP2-202ENST00000378034 PPFIBP2Q8ND30 876 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 OR56A3Q8NH54 315 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 RHEBL1Q8TAI7 183 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 FGF11Q92914 225 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 SGPP1Q9BX95 441 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 FGF21Q9NSA1 209 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 RARRES3Q9UL19 164 aa12.75□□□□□ -0.37
CKAP2-202ENST00000378034 PRAMEF10O60809 474 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 GUCA1CO95843 209 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 TFEBP19484 476 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 MAGP20916 626 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 GRIA3P42263 894 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 TBPL1P62380 186 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 DLG1Q12959 904 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 TSTA3Q13630 321 aaPredicted RBP12.74□□□□□ -0.37
CKAP2-202ENST00000378034 TGFBIQ15582 683 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 THEMIS2Q5TEJ8 643 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 KIAA1614Q5VZ46 1190 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 FIGLAQ6QHK4 219 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 MBOAT1Q6ZNC8 495 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 ISCA2Q86U28 154 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 LCA5Q86VQ0 697 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 PPP1R3BQ86XI6 285 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 SNIP1Q8TAD8 396 aaKnown RBP12.74□□□□□ -0.37
CKAP2-202ENST00000378034 PTERQ96BW5 349 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 NXNL1Q96CM4 212 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 ZNF501Q96CX3 271 aaPredicted RBP12.74□□□□□ -0.37
CKAP2-202ENST00000378034 MIPEPQ99797 713 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 HAUS8Q9BT25 410 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 VPS11Q9H270 941 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 MRPS30Q9NP92 439 aaKnown RBP12.74□□□□□ -0.37
CKAP2-202ENST00000378034 TAC3Q9UHF0 121 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 RNF112Q9ULX5 631 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.74□□□□□ -0.37
CKAP2-202ENST00000378034 KERAO60938 352 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 SHBGP04278 402 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 PSMB5P28074 263 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 PCBP4P57723 403 aaKnown RBP12.74□□□□□ -0.37
CKAP2-202ENST00000378034 RELAQ04206 551 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 NAE1Q13564 534 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 KCNAB1Q14722 419 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 OR4D1Q15615 310 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 ZIC1Q15915 447 aa12.74□□□□□ -0.37
CKAP2-202ENST00000378034 TSNAXIP1Q2TAA8 658 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms