RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 PCDHB9Q9Y5E1 797 aa13.5□□□□□ -0.25
SF1-205ENST00000377394 ERVH48-1M5A8F1 160 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 ADAM12O43184 909 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 GUCA1CO95843 209 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PRKACBP22694 351 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 FMO3P31513 532 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 HMGCLP35914 325 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PPP2R2BQ00005 443 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 CYP4F3Q08477 520 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 FAM174BQ3ZCQ3 159 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 NXNL2Q5VZ03 156 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PRSS55Q6UWB4 352 aaPredicted RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 LINC00299Q6ZSB3 139 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 CHCHD4Q8N4Q1 142 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 NATD1Q8N6N6 113 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PJA1Q8NG27 643 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 FRS2Q8WU20 508 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 C2orf15Q8WU43 125 aaKnown RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 PLD4Q96BZ4 506 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 RDH12Q96NR8 316 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 CASD1Q96PB1 797 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 TTYH2Q9BSA4 534 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 BOCQ9BWV1 1114 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 FARSBQ9NSD9 589 aaKnown RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 CRNNQ9UBG3 495 aaPredicted RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 ADGRE2Q9UHX3 823 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 INTS6Q9UL03 887 aaKnown RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 PKP3Q9Y446 797 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 OARD1Q9Y530 152 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 NT5C1B-RDH14C9J2C7 533 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 MYCLP1P12525 358 aaPredicted RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 CTPS1P17812 591 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 ALOX12P18054 663 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 GDF5P43026 501 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PIK3CGP48736 1102 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 GABARAPL2P60520 117 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 ISL1P61371 349 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PRKCZQ05513 592 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 TWF1Q12792 350 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 SMU1Q2TAY7 513 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 HECTD3Q5T447 861 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 NEK5Q6P3R8 708 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 SERPINA9Q86WD7 417 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 CADM2Q8N3J6 435 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 CARNMT1Q8N4J0 409 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 SPERTQ8NA61 448 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PROX1Q92786 737 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 LGALS12Q96DT0 336 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 ZFYVE19Q96K21 471 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 THUMPD3Q9BV44 507 aaKnown RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 GPR63Q9BZJ6 419 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 C6orf62Q9GZU0 229 aaPredicted RBP13.49□□□□□ -0.25
SF1-205ENST00000377394 OPTCQ9UBM4 332 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PRSS21Q9Y6M0 314 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 MAU2Q9Y6X3 613 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 PLXNA4Q9HCM2 1894 aa13.49□□□□□ -0.25
SF1-205ENST00000377394 ISPDA4D126 451 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 FFAR3O14843 346 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 GPR42O15529 346 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 ALPIP09923 528 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 FCGRTP55899 365 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 MAPKAPK3Q16644 382 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 SPANXN4Q5MJ08 99 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 ADGRF1Q5T601 910 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 AGAP6Q5VW22 663 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 TTC23Q5W5X9 447 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 PTRHD1Q6GMV3 140 aaKnown RBP13.48□□□□□ -0.25
SF1-205ENST00000377394 CERS6Q6ZMG9 384 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 PLD3Q8IV08 490 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 SVOPQ8N4V2 548 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 AGAP4Q96P64 663 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 DEPDC7Q96QD5 511 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 FEM1AQ9BSK4 669 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 RRAGCQ9HB90 399 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 USE1Q9NZ43 259 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 LIMD1Q9UGP4 676 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 HTTP42858 3142 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 GSTA4O15217 222 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 RGS14O43566 566 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 CST1P01037 141 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 NTRK1P04629 796 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 COL6A1P12109 1028 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 BMP1P13497 986 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 RPS3P23396 243 aaKnown RBP eCLIP13.48□□□□□ -0.259e-7■□□□□ 8.9
SF1-205ENST00000377394 AKT1P31749 480 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 KRT6CP48668 564 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 MASP1P48740 699 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 ACLYP53396 1101 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 HMGCS1Q01581 520 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 CDK10Q15131 360 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 RUNDC3AQ59EK9 446 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 LAIR1Q6GTX8 287 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 FAM151BQ6UXP7 276 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 RNF165Q6ZSG1 346 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 GALNT12Q8IXK2 581 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 KRTCAP2Q8N6L1 136 aa13.48□□□□□ -0.25
SF1-205ENST00000377394 TP53I13Q8NBR0 393 aaPredicted RBP13.48□□□□□ -0.25
SF1-205ENST00000377394 ZNF555Q8NEP9 628 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms