RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SERTAD3Q9UJW9 196 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 FAM234BA2RU67 622 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 GRID2O43424 1007 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 GJB5O95377 273 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 RLN1P04808 185 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 DBIP07108 87 aaKnown RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 ACVR2AP27037 513 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 FAUP35544 74 aaKnown RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 ENPP2Q13822 863 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 SMCO1Q147U7 214 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 C1orf52Q8N6N3 182 aaKnown RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 BANPQ8N9N5 519 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 AKAP12Q02952 1782 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 PIRO00625 290 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 PCSK2P16519 638 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 IL18Q14116 193 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 PUM1Q14671 1186 aaKnown RBP eCLIP13.31□□□□□ -0.28
GPC6-201ENST00000377047 C6orf52Q5T4I8 152 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 PDE12Q6L8Q7 609 aaKnown RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 AHSA2Q719I0 299 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 DCAKDQ8WVC6 231 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 GMLQ99445 158 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 C8orf4Q9NR00 106 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 SPHK2Q9NRA0 654 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 ZNF358Q9NW07 568 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 GRHL1Q9NZI5 618 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 COL1A1P02452 1464 aaPredicted RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 ARHGEF33A8MVX0 844 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 SCDO00767 359 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 VEGFBP49765 207 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 DPY19L1Q2PZI1 675 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 SLC9B1Q4ZJI4 515 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 SLC30A8Q8IWU4 369 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 KCTD3Q9Y597 815 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 PRAMEF11O60813 436 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 DLDP09622 509 aaKnown RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 PTX3P26022 381 aaPredicted RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 RPL5P46777 297 aaKnown RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 AP1S2P56377 157 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 ERVK-8P63133 956 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 OLIG2Q13516 323 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 RGS21Q2M5E4 152 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 RALGPS1Q5JS13 557 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 OXR1Q8N573 874 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 OR4K17Q8NGC6 315 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 SCRN3Q0VDG4 424 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 SERINC5Q86VE9 423 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 LNX2Q8N448 690 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 CLDN19Q8N6F1 224 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 OR6K6Q8NGW6 343 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 LRTOMTQ8WZ04 291 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 ABCB9Q9NP78 766 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 SIX4Q9UIU6 781 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 RGPD8O14715 1765 aaPredicted RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 MPZL2O60487 215 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 PRAMEF12O95522 483 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 GPIP06744 558 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 CLCN4P51793 760 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 ARF5P84085 180 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 SLC25A11Q02978 314 aaKnown RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 CYP1B1Q16678 543 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 FRG2Q64ET8 278 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 KCTD8Q6ZWB6 473 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 TRIM74Q86UV6 250 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 FAM13CQ8NE31 585 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 FRG2BQ96QU4 278 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 PCYT2Q99447 389 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 GPR62Q9BZJ7 368 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 CAPN8A6NHC0 703 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 LEFTY1O75610 366 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 PRPS1L1P21108 318 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 VLDLRP98155 873 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 PAFAH1B3Q15102 231 aaKnown RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 FAM156AQ8NDB6 213 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 SLC35B2Q8TB61 432 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 MARCH7Q9H992 704 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 TVP23BQ9NYZ1 205 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 P2RX2Q9UBL9 471 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 B4GALT6Q9UBX8 382 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 ZNF208O43345 1280 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 COQ9O75208 318 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 NADKO95544 446 aaPredicted RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 RPS9P46781 194 aaKnown RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 CDKN1CP49918 316 aaPredicted RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 DLG1Q12959 904 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 SMPD3Q9NY59 655 aaPredicted RBP13.3□□□□□ -0.28
GPC6-201ENST00000377047 SPATA7Q9P0W8 599 aa13.3□□□□□ -0.28
GPC6-201ENST00000377047 ANGPTL1O95841 491 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 POLR2CP19387 275 aaPredicted RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 RAB8AP61006 207 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 GPRC6AQ5T6X5 926 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 IQCF2Q8IXL9 164 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 HM13Q8TCT9 377 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 STRADBQ9C0K7 418 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 MYADML2A6NDP7 307 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 JUNP05412 331 aaKnown RBP13.29□□□□□ -0.28
GPC6-201ENST00000377047 ACADLP28330 430 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 DSTNP60981 165 aa13.29□□□□□ -0.28
GPC6-201ENST00000377047 SERINC3Q13530 473 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms