RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 PPP4R1Q8TF05 950 aa16.7■□□□□ 0.26
HLA-A-201ENST00000376802 ZUFSPQ96AP4 578 aa16.7■□□□□ 0.26
HLA-A-201ENST00000376802 SELENOSQ9BQE4 189 aa16.7■□□□□ 0.26
HLA-A-201ENST00000376802 FRMD8P1Q9BZ68 369 aaPredicted RBP16.7■□□□□ 0.26
HLA-A-201ENST00000376802 SOX17Q9H6I2 414 aaPredicted RBP16.7■□□□□ 0.26
HLA-A-201ENST00000376802 MRM3Q9HC36 420 aaKnown RBP16.7■□□□□ 0.26
HLA-A-201ENST00000376802 TREX1Q9NSU2 369 aa16.7■□□□□ 0.26
HLA-A-201ENST00000376802 INTS7Q9NVH2 962 aaKnown RBP16.7■□□□□ 0.26
HLA-A-201ENST00000376802 SLC39A10Q9ULF5 831 aa16.7■□□□□ 0.26
HLA-A-201ENST00000376802 ZNF148Q9UQR1 794 aa16.7■□□□□ 0.26
HLA-A-201ENST00000376802 RUVBL2Q9Y230 463 aaKnown RBP16.7■□□□□ 0.26
HLA-A-201ENST00000376802 LOC105369274A0A096LPK9 316 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 LOC102723532A0A0G2JNH3 316 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 A0A1W2PPV9 198 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 CD3EAPO15446 510 aaKnown RBP16.69■□□□□ 0.26
HLA-A-201ENST00000376802 FKBP9O95302 570 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 ZSCAN5DPP0CG00 497 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 TTPAP49638 278 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 CRADDP78560 199 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 SNX1Q13596 522 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 AARS2Q5JTZ9 985 aaKnown RBP16.69■□□□□ 0.26
HLA-A-201ENST00000376802 PCID2Q5JVF3 399 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 WASHC2DQ5SRD0 308 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 AGAP7PQ5VUJ5 663 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 SLC13A5Q86YT5 568 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-201ENST00000376802 PARP9Q8IXQ6 854 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 OR4N4Q8N0Y3 316 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 METTL27Q8N6F8 245 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-201ENST00000376802 OR11G2Q8NGC1 345 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 C5orf34Q96MH7 638 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 AGAP4Q96P64 663 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 ANAPC5Q9UJX4 755 aa16.69■□□□□ 0.26
HLA-A-201ENST00000376802 NXT1Q9UKK6 140 aaKnown RBP16.69■□□□□ 0.26
HLA-A-201ENST00000376802 TTC7AQ9ULT0 858 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-201ENST00000376802 NOVA2Q9UNW9 492 aaKnown RBP16.69■□□□□ 0.26
HLA-A-201ENST00000376802 SRPX2O60687 465 aaPredicted RBP16.68■□□□□ 0.26
HLA-A-201ENST00000376802 RPL22P35268 128 aaKnown RBP16.68■□□□□ 0.26
HLA-A-201ENST00000376802 BDKRB1P46663 353 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 VSX2P58304 361 aaPredicted RBP16.68■□□□□ 0.26
HLA-A-201ENST00000376802 YBX1P67809 324 aaKnown RBP16.68■□□□□ 0.26
HLA-A-201ENST00000376802 FAM214AQ32MH5 1076 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 PTRHD1Q6GMV3 140 aaKnown RBP16.68■□□□□ 0.26
HLA-A-201ENST00000376802 ST6GALNAC3Q8NDV1 305 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 PPHLN1Q8NEY8 458 aaKnown RBP16.68■□□□□ 0.26
HLA-A-201ENST00000376802 OR2L3Q8NG85 312 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 OR2A1Q8NGT9 310 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 HMGCLL1Q8TB92 370 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 DNAJB14Q8TBM8 379 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 RAD51AP1Q96B01 352 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 MIPEPQ99797 713 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 RAB11FIP5Q9BXF6 653 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 LHPPQ9H008 270 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 AGPAT4Q9NRZ5 378 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 SEMA3GQ9NS98 782 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 IL1RAPL1Q9NZN1 696 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 MAU2Q9Y6X3 613 aa16.68■□□□□ 0.26
HLA-A-201ENST00000376802 HYKKA2RU49 373 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 E2F3O00716 465 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 RPS3P23396 243 aaKnown RBP eCLIP16.67■□□□□ 0.265e-9■■■□□ 17.6
HLA-A-201ENST00000376802 ARNTP27540 789 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 NMBRP28336 390 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 TSFMP43897 325 aaKnown RBP16.67■□□□□ 0.26
HLA-A-201ENST00000376802 TMED2Q15363 201 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 SIX1Q15475 284 aaPredicted RBP16.67■□□□□ 0.26
HLA-A-201ENST00000376802 TUBB8Q3ZCM7 444 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 CTSL3PQ5NE16 218 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 RNF10Q8N5U6 811 aaKnown RBP16.67■□□□□ 0.26
HLA-A-201ENST00000376802 TTC29Q8NA56 475 aaPredicted RBP16.67■□□□□ 0.26
HLA-A-201ENST00000376802 GRHL3Q8TE85 626 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 BIRC8Q96P09 236 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 PAK5Q9P286 719 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 STOX2Q9P2F5 926 aaPredicted RBP16.67■□□□□ 0.26
HLA-A-201ENST00000376802 GNPTGQ9UJJ9 305 aa16.67■□□□□ 0.26
HLA-A-201ENST00000376802 KPNA5O15131 536 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 KLHL18O94889 574 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 SESN2P58004 480 aaPredicted RBP16.66■□□□□ 0.26
HLA-A-201ENST00000376802 KLC1Q07866 573 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 ELOAQ14241 798 aaKnown RBP16.66■□□□□ 0.26
HLA-A-201ENST00000376802 FASTKQ14296 549 aaKnown RBP16.66■□□□□ 0.26
HLA-A-201ENST00000376802 GBX1Q14549 363 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 ZNF169Q14929 603 aaPredicted RBP16.66■□□□□ 0.26
HLA-A-201ENST00000376802 RBBP7Q16576 425 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 SEL1L2Q5TEA6 688 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 RNF44Q7L0R7 432 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 OTOAQ7RTW8 1153 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 TXLNBQ8N3L3 684 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 MPP5Q8N3R9 675 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 CCDC89Q8N998 374 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 STT3BQ8TCJ2 826 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 THOC3Q96J01 351 aaKnown RBP16.66■□□□□ 0.26
HLA-A-201ENST00000376802 PANX3Q96QZ0 392 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 SYNPO2LQ9H987 977 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 ZNF304Q9HCX3 659 aa16.66■□□□□ 0.26
HLA-A-201ENST00000376802 EIF2B3Q9NR50 452 aaKnown RBP16.66■□□□□ 0.26
HLA-A-201ENST00000376802 ZC3H7BQ9UGR2 993 aaKnown RBP16.66■□□□□ 0.26
HLA-A-201ENST00000376802 ABCA12Q86UK0 2595 aa16.65■□□□□ 0.26
HLA-A-201ENST00000376802 A0A0J9YVX5 310 aa16.65■□□□□ 0.26
HLA-A-201ENST00000376802 NDUFS3O75489 264 aa16.65■□□□□ 0.26
HLA-A-201ENST00000376802 MATN4O95460 622 aa16.65■□□□□ 0.26
HLA-A-201ENST00000376802 ZGLP1P0C6A0 271 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms